Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pou5f3 | 0.061 | si:ch1073-429i10.3.1 | -0.027 |
| polr3gla | 0.057 | ccni | -0.025 |
| stm | 0.056 | marcksl1a | -0.023 |
| nnr | 0.055 | calm1a | -0.023 |
| s100a1 | 0.055 | gpm6aa | -0.022 |
| add3b | 0.054 | rnasekb | -0.022 |
| si:ch1073-80i24.3 | 0.054 | tuba1c | -0.022 |
| si:ch211-152c2.3 | 0.054 | gapdhs | -0.021 |
| asb11 | 0.053 | hbbe1.3 | -0.021 |
| LOC108190024 | 0.053 | atp6v0cb | -0.020 |
| hspb1 | 0.051 | hbae3 | -0.020 |
| foxd5 | 0.049 | pvalb1 | -0.020 |
| zgc:56699 | 0.049 | rtn1a | -0.020 |
| fbl | 0.048 | stmn1b | -0.020 |
| lrwd1 | 0.048 | wu:fb55g09 | -0.020 |
| si:dkey-66i24.9 | 0.048 | zgc:56493 | -0.020 |
| si:dkey-92i17.2 | 0.048 | atp6v1e1b | -0.019 |
| bms1 | 0.047 | ckbb | -0.019 |
| dkc1 | 0.047 | gpm6ab | -0.019 |
| si:ch211-226h8.14 | 0.047 | pvalb2 | -0.019 |
| si:dkeyp-114g9.1 | 0.047 | atp6v1g1 | -0.018 |
| zmp:0000000624 | 0.047 | elavl3 | -0.018 |
| lig1 | 0.046 | gng3 | -0.018 |
| LOC100008030 | 0.046 | hbae1.1 | -0.018 |
| si:ch211-173m16.2 | 0.046 | sncb | -0.018 |
| vrtn | 0.046 | cct2 | -0.018 |
| polr2gl | 0.045 | atpv0e2 | -0.017 |
| vox | 0.045 | cyt1 | -0.017 |
| zic2b | 0.045 | fam168a | -0.017 |
| ddx18 | 0.044 | gabarapl2 | -0.017 |
| gar1 | 0.044 | hbbe1.1 | -0.017 |
| hnrnpa1b | 0.044 | krt4 | -0.017 |
| npm1a | 0.044 | oaz1b | -0.017 |
| rbmx2 | 0.044 | vamp2 | -0.017 |
| sp5l | 0.044 | atp6ap2 | -0.016 |