| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| her15.1 | 0.402 | atp6v0cb | -0.229 |
| LOC798783 | 0.389 | snap25b | -0.224 |
| her12 | 0.382 | atp6v1e1b | -0.194 |
| her4.2 | 0.380 | sypb | -0.189 |
| her4.1 | 0.368 | syt5b | -0.189 |
| XLOC-003690 | 0.360 | gapdhs | -0.187 |
| hes2.2 | 0.355 | atp6v1g1 | -0.178 |
| XLOC-003692 | 0.349 | rnasekb | -0.177 |
| rrm1 | 0.346 | atpv0e2 | -0.175 |
| si:dkey-238o13.4 | 0.341 | vamp2 | -0.167 |
| notch1b | 0.340 | rs1a | -0.164 |
| si:ch73-21g5.7 | 0.339 | sncb | -0.161 |
| CU634008.1 | 0.338 | ckbb | -0.157 |
| dla | 0.333 | ppdpfb | -0.155 |
| XLOC-003689 | 0.324 | calm1a | -0.154 |
| lbr | 0.324 | gng3 | -0.154 |
| CU467822.1 | 0.320 | atp6ap2 | -0.150 |
| sox3 | 0.318 | zc4h2 | -0.148 |
| ccna2 | 0.317 | ndrg4 | -0.147 |
| ascl1a | 0.317 | atp1a3a | -0.145 |
| fzd5 | 0.316 | calb2b | -0.144 |
| notch3 | 0.314 | sh3gl2a | -0.140 |
| lfng | 0.312 | atp1b2a | -0.140 |
| mdka | 0.306 | xbp1 | -0.140 |
| hes6 | 0.304 | otx5 | -0.140 |
| LOC101886429 | 0.302 | tob1b | -0.139 |
| sox9b | 0.300 | pcbp3 | -0.139 |
| abhd6a | 0.299 | olfm1b | -0.138 |
| olig2 | 0.299 | id2a | -0.138 |
| her4.4 | 0.297 | elavl3 | -0.135 |
| notch1a | 0.294 | kdm6bb | -0.132 |
| rrm2 | 0.290 | cpe | -0.131 |
| ahcy | 0.290 | cnrip1b | -0.131 |
| ccnd1 | 0.289 | zfhx4 | -0.129 |
| tuba8l | 0.282 | spock3 | -0.129 |