si:dkey-5n18.1 (mesenchyme): Daniocell

Daniocell

si:dkey-5n18.1 (mesenchyme)

si:dkey-5n18.1 ZFIN

Gene expression UMAP

Download UMAP

Other cell groups

all cells	blastomeres	PGCs	endoderm	axial mesoderm
muscle	mural cells / non-skeletal muscle	mesenchyme	hematopoietic / vasculature	pronephros
neural	spinal cord / glia	eye	taste / olfactory	otic / lateral line
epidermis	periderm	fin	ionocytes / mucous	pigment cells

Expression by stage/cluster

Correlated gene expression

Positive correlation		Negative correlation
Gene	r	Gene	r
cxcr3.2	0.137	hmgb2a	-0.028
si:ch73-343l4.2	0.112	hmga1a	-0.026
NPC2 (1 of many)	0.110	si:ch211-222l21.1	-0.026
zgc:158260	0.108	hmgn2	-0.026
BX088587.1	0.104	hsp90ab1	-0.025
adgrg3	0.103	rps7	-0.025
CR788249.2	0.100	rplp0	-0.024
si:ch211-8c17.3	0.099	pabpc1a	-0.023
en1a	0.097	hmgb2b	-0.023
fgl1	0.097	ddx39ab	-0.022
si:ch211-266g18.9	0.095	nucks1a	-0.022
si:dkey-148a17.6	0.091	rpl22l1	-0.022
si:busm1-266f07.2	0.091	khdrbs1a	-0.021
si:dkey-238d18.3	0.089	cirbpa	-0.021
si:ch211-154c21.1	0.088	psma2	-0.021
lgals17	0.087	rps4x	-0.021
psmb8a	0.084	hnrnpa0b	-0.021
hs6st3b	0.082	hnrnpaba	-0.021
fcer1g	0.081	hmgn6	-0.020
mhc1uka	0.080	anp32a	-0.020
mpeg1.1	0.079	sf3b5	-0.020
acp5b	0.076	seta	-0.020
lcp1	0.075	pomp	-0.020
BX890624.2	0.074	rbm4.3	-0.020
si:ch211-147m6.1	0.074	syncrip	-0.020
omd	0.070	lsm7	-0.020
mkxb	0.070	si:ch211-288g17.3	-0.019
havcr1	0.069	rbmx	-0.019
pimr60	0.069	snrpe	-0.019
mkrn2os.2	0.069	rbx1	-0.019
zgc:195356	0.067	cirbpb	-0.019
en1b	0.062	h2afvb	-0.019
si:dkey-183i3.6	0.062	hmgb3a	-0.019
si:ch211-165d12.4	0.061	hnrnpa0l	-0.019
slc5a8	0.061	psma5	-0.019