| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| her4.1 | 0.473 | krt18b | -0.112 |
| her12 | 0.472 | si:dkey-21a6.5 | -0.102 |
| her4.2 | 0.464 | zgc:110339 | -0.098 |
| XLOC-003689 | 0.437 | aldh9a1a.1 | -0.091 |
| sox3 | 0.416 | reep5 | -0.087 |
| XLOC-003690 | 0.415 | gstp1 | -0.087 |
| LOC798783 | 0.406 | si:dkey-204f11.64 | -0.087 |
| abhd6a | 0.403 | krt8 | -0.085 |
| XLOC-003692 | 0.402 | nupr1a | -0.085 |
| dla | 0.386 | anxa4 | -0.085 |
| her15.1 | 0.378 | bloc1s6 | -0.085 |
| her4.4 | 0.365 | pttg1ipb | -0.083 |
| cldn5a | 0.359 | gpr143 | -0.083 |
| CU634008.1 | 0.357 | trpm1b | -0.083 |
| nrarpb | 0.347 | rhag | -0.082 |
| sb:cb81 | 0.333 | phyhd1 | -0.081 |
| sox19a | 0.326 | slc22a7a | -0.080 |
| notch3 | 0.323 | elovl1b | -0.079 |
| her2 | 0.321 | syngr1a | -0.079 |
| lrrn1 | 0.320 | uraha | -0.079 |
| dld | 0.312 | ahnak | -0.078 |
| CU467822.1 | 0.307 | fxyd6l | -0.077 |
| msi1 | 0.305 | gmps | -0.077 |
| gadd45gb.1 | 0.295 | csrp2 | -0.076 |
| gfap | 0.294 | pfn1 | -0.075 |
| notch1b | 0.290 | BX571715.1 | -0.074 |
| zgc:165461 | 0.286 | pmp22b | -0.073 |
| CR848047.1 | 0.284 | smim29 | -0.073 |
| zgc:110796 | 0.283 | cox4i2 | -0.073 |
| her13 | 0.281 | LOC103909099 | -0.073 |
| BX664610.1 | 0.273 | ivns1abpa | -0.072 |
| notch1a | 0.267 | snai1a | -0.071 |
| si:ch211-57n23.4 | 0.266 | arhgef33 | -0.071 |
| lfng | 0.263 | LOC103910009 | -0.071 |
| hes6 | 0.259 | id2a | -0.070 |