si:ch211-250c4.5 (mesenchyme): Daniocell

Daniocell

si:ch211-250c4.5 (mesenchyme)

si:ch211-250c4.5 ZFIN

Gene expression UMAP

Download UMAP

Other cell groups

all cells	blastomeres	PGCs	endoderm	axial mesoderm
muscle	mural cells / non-skeletal muscle	mesenchyme	hematopoietic / vasculature	pronephros
neural	spinal cord / glia	eye	taste / olfactory	otic / lateral line
epidermis	periderm	fin	ionocytes / mucous	pigment cells

Expression by stage/cluster

Correlated gene expression

Positive correlation		Negative correlation
Gene	r	Gene	r
LO018208.1	0.165	tmsb4x	-0.030
otos	0.104	col1a2	-0.029
epyc	0.090	jun	-0.028
col9a3	0.087	hsp90ab1	-0.027
si:dkey-69c1.1	0.087	col1a1b	-0.025
col9a2	0.084	col1a1a	-0.024
mir733	0.083	si:ch73-1a9.3	-0.024
col11a2	0.083	hmgb2b	-0.023
col2a1a	0.082	cirbpb	-0.023
col9a1a	0.082	ptmab	-0.023
BX323800.1	0.081	krt8	-0.022
matn4	0.078	fabp3	-0.022
cnmd	0.077	krt18b	-0.022
col11a1a	0.075	hmga1a	-0.022
si:dkey-238i5.3	0.074	rbp5	-0.021
si:dkey-191c17.2	0.074	krt18a.1	-0.021
si:dkey-31g6.6	0.073	cirbpa	-0.021
AL929222.2	0.065	si:ch211-222l21.1	-0.021
CR936249.1	0.065	jpt1b	-0.021
si:ch211-120k19.1	0.064	col6a2	-0.021
qsox1	0.061	h2afvb	-0.020
si:dkey-6n6.1	0.058	col5a2a	-0.020
col2a1b	0.057	ran	-0.020
si:dkey-191j3.2	0.057	marcksb	-0.019
cthrc1b	0.056	h3f3a	-0.019
cthrc1a	0.056	tubb4b	-0.019
wisp3	0.055	ccl25b	-0.019
taar19k	0.054	hmgb2a	-0.018
fgfbp2b	0.053	col6a1	-0.018
zgc:162879	0.053	col6a4a	-0.018
srpx	0.053	col6a3	-0.018
ucmab	0.053	lsp1	-0.018
matn1	0.052	sumo3b	-0.018
LOC108183933	0.051	si:ch211-39i22.1	-0.018
LOC101884261	0.051	fxyd6l	-0.018