si:ch211-161n3.3 (mesenchyme): Daniocell

Daniocell

si:ch211-161n3.3 (mesenchyme)

si:ch211-161n3.3 ZFIN

Gene expression UMAP

Download UMAP

Other cell groups

all cells	blastomeres	PGCs	endoderm	axial mesoderm
muscle	mural cells / non-skeletal muscle	mesenchyme	hematopoietic / vasculature	pronephros
neural	spinal cord / glia	eye	taste / olfactory	otic / lateral line
epidermis	periderm	fin	ionocytes / mucous	pigment cells

Expression by stage/cluster

Correlated gene expression

Positive correlation		Negative correlation
Gene	r	Gene	r
LOC101885301	0.143	metrnla	-0.014
CU681836.2	0.121	vdrb	-0.013
si:ch73-281i18.6	0.103	fgfbp2b	-0.012
LOC110438454	0.089	rpl21	-0.011
CABZ01056052.1	0.078	fgfr3	-0.011
rln3b	0.075	fkbp3	-0.010
XLOC-043953	0.071	col9a2	-0.010
XLOC-029654	0.064	sdhb	-0.010
XLOC-018977	0.064	sec61b	-0.010
LOC103908743	0.064	gosr2	-0.010
atf2	0.062	rpl18a	-0.010
LOC100537404	0.059	foxc1b	-0.010
si:dkey-88n24.7	0.059	sub1a	-0.010
LOC101882460.1	0.058	dctn5	-0.010
LO017711.1	0.057	col9a3	-0.010
mir130c-1	0.057	dldh	-0.010
CACNA2D1	0.056	cpxm1a	-0.010
RF00056	0.055	tpm1	-0.009
si:ch73-184c24.1	0.055	sec22bb	-0.009
BX248511.1	0.054	barx1	-0.009
erbb4b	0.051	apoa2	-0.009
si:ch73-338o16.4	0.050	col11a2	-0.009
nrp1b	0.050	lrrc59	-0.009
ghdc	0.050	dnajc19	-0.009
LOC108190625	0.049	chd4a	-0.009
vtna	0.049	col11a1a	-0.009
faimb	0.049	gpx8	-0.009
si:dkeyp-35e5.5	0.048	cox5ab	-0.009
si:ch211-121a2.4	0.046	rgmb	-0.009
NC-002333.10	0.045	atp5mf	-0.009
BX324164.3	0.045	cpn1	-0.009
calb1	0.045	sdf4	-0.009
add3b	0.045	pdcd6	-0.009
zmat4a	0.045	ccdc47	-0.009
PLPP7 (1 of many)	0.044	wwp2	-0.009