si:ch211-113j14.1 (mesenchyme): Daniocell

Daniocell

si:ch211-113j14.1 (mesenchyme)

si:ch211-113j14.1 ZFIN

Gene expression UMAP

Download UMAP

Other cell groups

all cells	blastomeres	PGCs	endoderm	axial mesoderm
muscle	mural cells / non-skeletal muscle	mesenchyme	hematopoietic / vasculature	pronephros
neural	spinal cord / glia	eye	taste / olfactory	otic / lateral line
epidermis	periderm	fin	ionocytes / mucous	pigment cells

Expression by stage/cluster

Correlated gene expression

Positive correlation		Negative correlation
Gene	r	Gene	r
XLOC-001318	0.125	snrpf	-0.026
nitr5	0.113	ran	-0.024
si:dkey-65b12.10	0.099	ybx1	-0.023
si:ch73-106k19.2	0.098	hmgb2b	-0.023
XLOC-008029	0.095	si:ch211-222l21.1	-0.022
zgc:112416	0.087	hmga1a	-0.022
pllp	0.078	hnrnpa0b	-0.022
si:ch73-379f7.4	0.075	h3f3d	-0.022
si:ch1073-394i4.1	0.070	cirbpa	-0.022
si:ch211-281p14.2	0.069	nucks1a	-0.021
syt15	0.068	eef1g	-0.021
si:dkey-16p6.2	0.068	khdrbs1a	-0.021
dgkq	0.066	hmgb2a	-0.021
LOC103911479	0.066	rpl11	-0.020
rxfp3	0.063	denr	-0.020
FO834888.1	0.062	serbp1a	-0.020
LOC100537845	0.060	h3f3a	-0.019
CR925728.3	0.059	rps23	-0.019
apobb.2	0.058	snrpb	-0.019
LOC100004392	0.057	atp5mc1	-0.019
BX248410.1	0.055	hmgb1b	-0.019
spata6l	0.053	fkbp1aa	-0.019
si:dkey-13n15.2	0.052	hnrnpabb	-0.019
si:dkey-27l15.1	0.051	snrpd2	-0.018
pik3r6b	0.051	snrpe	-0.018
fam120a	0.050	cbx5	-0.018
LOC108179520	0.050	si:ch1073-429i10.3.1	-0.018
lama3	0.050	rps19	-0.018
si:ch211-146l10.8	0.048	ppa1b	-0.018
zgc:193726	0.048	setb	-0.018
XLOC-024456	0.046	psma3	-0.018
si:ch211-133n4.6	0.044	sf3a2	-0.017
LOC103909742	0.044	snrpd3l	-0.017
CU915818.1	0.044	btf3	-0.017
vtcn1	0.043	srsf11	-0.017