sema5bb (pronephros): Daniocell

Daniocell

sema5bb (pronephros)

"sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5Bb" ZFIN

Gene expression UMAP

Download UMAP

Other cell groups

all cells	blastomeres	PGCs	endoderm	axial mesoderm
muscle	mural cells / non-skeletal muscle	mesenchyme	hematopoietic / vasculature	pronephros
neural	spinal cord / glia	eye	taste / olfactory	otic / lateral line
epidermis	periderm	fin	ionocytes / mucous	pigment cells

Expression by stage/cluster

Correlated gene expression

Positive correlation		Negative correlation
Gene	r	Gene	r
XLOC-035578	0.393	cox6c	-0.071
si:ch211-254p10.2	0.373	mt-nd2	-0.068
ighv1-4	0.353	cox7c	-0.065
zgc:56628	0.337	rplp2	-0.061
FO704758.2	0.331	uba52	-0.059
epn3b	0.316	rpl36a	-0.059
dnd1	0.309	NDUFB1	-0.059
ddx4	0.308	uqcrq	-0.058
mir30a	0.306	mt-atp6	-0.058
capn5b	0.287	si:dkey-74k8.3	-0.057
LOC108180743	0.287	atp1b1a	-0.057
RYR2	0.287	si:ch211-139a5.9	-0.056
si:ch73-22o18.1	0.287	cox6a1	-0.056
LOC100535838	0.281	si:ch1073-443f11.2	-0.055
thsd7ab	0.275	atp5f1e	-0.055
si:ch211-250n8.1	0.271	mrps35	-0.055
plcb4	0.269	atp1a1a.4	-0.055
XLOC-021896	0.264	rbm47	-0.055
celsr2	0.262	zgc:171480	-0.054
skor1b	0.261	mpc1	-0.054
AL845362.1	0.259	ppargc1b	-0.053
dusp8b	0.259	cdh17	-0.053
gpx7	0.257	ifrd2	-0.053
lingo4b	0.255	mt-nd3	-0.052
BX957322.1	0.252	lrpap1	-0.052
XLOC-043135	0.251	glud1b	-0.052
trim46a	0.250	slc25a20	-0.052
chrna2a	0.243	kif5ba	-0.051
syt16	0.234	mt-nd4l	-0.051
si:ch211-125e6.12	0.228	ndufa5	-0.051
XLOC-026761	0.227	ndufa10	-0.051
si:dkey-264d12.5	0.227	cox5b2	-0.051
si:dkeyp-4c4.1	0.227	aco1	-0.051
si:ch1073-186i23.1	0.226	cubn	-0.050
si:ch73-379j16.2	0.226	rplp1	-0.050