Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| cldn1 | 0.177 | hmgb1b | -0.041 |
| cldni | 0.173 | si:dkey-56m19.5 | -0.039 |
| ecrg4b | 0.172 | marcksb | -0.038 |
| zgc:101810 | 0.169 | nova2 | -0.035 |
| col5a3b | 0.167 | si:ch211-137a8.4 | -0.035 |
| si:dkey-102c8.3 | 0.167 | tuba1c | -0.035 |
| spaca4l | 0.166 | si:ch211-288g17.3 | -0.034 |
| kera | 0.160 | h2afva | -0.032 |
| myh9a | 0.160 | hnrnpa0a | -0.032 |
| zgc:86896 | 0.156 | tuba1a | -0.032 |
| col7a1 | 0.155 | pfn2l | -0.031 |
| itgb1b.1 | 0.155 | mdkb | -0.030 |
| padi2 | 0.155 | ckbb | -0.029 |
| col14a1b | 0.151 | gpm6aa | -0.029 |
| hcls1 | 0.150 | si:dkey-276j7.1 | -0.029 |
| lamb4 | 0.150 | ddx39ab | -0.028 |
| tp63 | 0.150 | hdac1 | -0.028 |
| itgb3a | 0.147 | hmgb3a | -0.028 |
| si:ch1073-406l10.2 | 0.143 | rtn1a | -0.028 |
| thy1 | 0.143 | smarce1 | -0.028 |
| col17a1a | 0.141 | top1l | -0.028 |
| pfn1 | 0.140 | marcksl1a | -0.028 |
| itgb1b.2 | 0.139 | elavl3 | -0.027 |
| lgals1l1 | 0.139 | fabp3 | -0.027 |
| abi3b | 0.138 | hnrnpub | -0.027 |
| ptk2bb | 0.138 | ilf3b | -0.027 |
| zgc:171775 | 0.138 | seta | -0.027 |
| mapk12a | 0.135 | si:ch211-133n4.4 | -0.027 |
| zgc:113223 | 0.135 | fscn1a | -0.026 |
| cxl34b.11 | 0.134 | ilf2 | -0.026 |
| zgc:85932 | 0.133 | lsm6 | -0.026 |
| aqp3a | 0.132 | nono | -0.026 |
| mmp28 | 0.132 | snrpd1 | -0.026 |
| si:rp71-77l1.1 | 0.132 | stmn1b | -0.026 |
| lgals3b | 0.129 | tmpob | -0.026 |