| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| scrt2 | 0.313 | tpm4a | -0.082 |
| pax6b | 0.294 | tmsb4x | -0.074 |
| ppp1r14c | 0.287 | aoc2 | -0.063 |
| nova2 | 0.285 | socs3a | -0.061 |
| foxg1b | 0.283 | fstl1b | -0.061 |
| neurod4 | 0.282 | krt8 | -0.060 |
| pax6a | 0.280 | zgc:153867 | -0.060 |
| otx2b | 0.280 | tmem88b | -0.059 |
| cadm3 | 0.279 | myl9b | -0.059 |
| gpm6ab | 0.268 | sdc4 | -0.058 |
| sept4a | 0.266 | actb2 | -0.055 |
| ndrg1b | 0.260 | vamp3 | -0.055 |
| gpm6aa | 0.255 | ckba | -0.053 |
| crx | 0.248 | zgc:162730 | -0.052 |
| tmem178b | 0.248 | pmp22a | -0.052 |
| si:ch211-137a8.4 | 0.246 | capns1b | -0.051 |
| ndrg4 | 0.246 | junba | -0.051 |
| vsx1 | 0.242 | cavin2b | -0.050 |
| pcbp3 | 0.239 | rpl3 | -0.050 |
| fabp7a | 0.237 | mfap2 | -0.050 |
| myt1b | 0.234 | jun | -0.049 |
| dscaml1 | 0.231 | anxa3b | -0.049 |
| otx5 | 0.230 | krt18a.1 | -0.049 |
| fnbp1a | 0.227 | ier2a | -0.049 |
| elavl3 | 0.219 | cnn2 | -0.049 |
| CU634008.1 | 0.215 | slc38a5b | -0.048 |
| cspg5a | 0.212 | anxa11b | -0.048 |
| si:ch73-290k24.5 | 0.210 | lxn | -0.048 |
| sox2 | 0.208 | flna | -0.048 |
| crabp1a | 0.205 | krt94 | -0.047 |
| six6b | 0.204 | anxa1a | -0.047 |
| tuba1c | 0.203 | cebpd | -0.047 |
| BX530077.1 | 0.201 | tmem176 | -0.047 |
| nol4la | 0.197 | lgals3b | -0.047 |
| rtn1a | 0.194 | hand2 | -0.046 |