Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| AMDHD1 | 0.299 | hmga1a | -0.173 |
| LOC103908985 | 0.295 | hmgb2a | -0.170 |
| CR855389.2 | 0.253 | hmgn6 | -0.166 |
| pdzk1ip1 | 0.237 | h3f3d | -0.165 |
| cubn | 0.229 | hmgb2b | -0.150 |
| fbp1b | 0.225 | si:ch211-222l21.1 | -0.148 |
| nit2 | 0.221 | cirbpb | -0.147 |
| aldob | 0.220 | si:ch73-281n10.2 | -0.145 |
| gip | 0.216 | cirbpa | -0.140 |
| si:zfos-2330d3.1 | 0.215 | hmgn2 | -0.134 |
| gstr | 0.215 | seta | -0.133 |
| si:ch73-29l19.1 | 0.214 | marcksb | -0.133 |
| adh8b | 0.214 | hnrnpaba | -0.133 |
| zgc:92040 | 0.213 | si:ch73-1a9.3 | -0.132 |
| grhprb | 0.213 | nucks1a | -0.131 |
| aldh16a1 | 0.213 | h2afvb | -0.129 |
| rfx6 | 0.212 | hnrnpabb | -0.127 |
| gapdh | 0.210 | hnrnpa0b | -0.125 |
| slc15a2 | 0.208 | hspb1 | -0.125 |
| COQ8A (1 of many) | 0.206 | hdac1 | -0.125 |
| slc26a1 | 0.205 | ptmab | -0.123 |
| si:dkey-194e6.1 | 0.204 | si:ch211-288g17.3 | -0.120 |
| lrp2a | 0.204 | hmgb1b | -0.118 |
| ASS1 | 0.204 | snrpd2 | -0.117 |
| trim66 | 0.204 | ewsr1a | -0.116 |
| aldh7a1 | 0.203 | anp32b | -0.115 |
| pnp6 | 0.203 | ilf3b | -0.115 |
| si:dkey-33i11.9 | 0.203 | syncrip | -0.115 |
| rgl1 | 0.203 | hmgn7 | -0.113 |
| alpl | 0.202 | wu:fb97g03 | -0.113 |
| ftcd | 0.200 | apoeb | -0.111 |
| rgrb | 0.199 | setb | -0.111 |
| idh1 | 0.198 | id3 | -0.111 |
| cd302 | 0.198 | marcksl1b | -0.110 |
| tmem174 | 0.197 | hnrnpa0a | -0.108 |