see annotation note
Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| zgc:195175 | 0.208 | mt-co1 | -0.025 |
| fndc7b | 0.174 | pabpc1a | -0.023 |
| CT956066.1 | 0.141 | ppp2cb | -0.019 |
| lct | 0.124 | idh2 | -0.018 |
| adam12 | 0.120 | mt-cyb | -0.017 |
| pcyt1bb | 0.113 | cdc42ep5 | -0.017 |
| si:ch73-309g22.1 | 0.099 | vamp3 | -0.017 |
| si:dkeyp-122a9.2 | 0.099 | rpl4 | -0.017 |
| si:dkey-150k17.3 | 0.097 | crtap | -0.017 |
| AL928920.4 | 0.090 | cct8 | -0.016 |
| zgc:162060 | 0.090 | asph | -0.016 |
| calml4a | 0.090 | cdc37 | -0.015 |
| srd5a2b | 0.089 | ndufb8 | -0.015 |
| alkbh2 | 0.088 | edf1 | -0.015 |
| sdk2b | 0.084 | alas1 | -0.015 |
| thpo | 0.080 | rpf2 | -0.015 |
| si:dkey-84h14.2 | 0.079 | vkorc1l1 | -0.015 |
| si:dkey-238k10.2 | 0.078 | NC-002333.4 | -0.015 |
| mc5ra | 0.076 | her9 | -0.015 |
| ehbp1l1b | 0.076 | cdh1 | -0.015 |
| znf1151 | 0.074 | arhgef5 | -0.015 |
| sult3st3 | 0.073 | cnn2 | -0.014 |
| or134-1 | 0.072 | pfdn4 | -0.014 |
| rufy2 | 0.070 | mrpl36 | -0.014 |
| or130-1 | 0.068 | hp1bp3 | -0.014 |
| si:cabz01071907.1 | 0.068 | nucks1a | -0.014 |
| si:dkey-166d12.2 | 0.067 | srp19 | -0.014 |
| si:ch211-117c9.1 | 0.067 | tpm3 | -0.014 |
| FO834800.2 | 0.066 | surf2 | -0.014 |
| prph | 0.065 | plcd1b | -0.014 |
| CU179702.2 | 0.064 | brd4 | -0.014 |
| XLOC-005140 | 0.063 | rab5if | -0.014 |
| arhgef3l | 0.061 | trnau1apb | -0.014 |
| CR352342.1 | 0.060 | apex1 | -0.014 |
| ms4a17a.14 | 0.060 | ddx27 | -0.014 |