| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nanog | 0.098 | NC-002333.4 | -0.118 |
| brd2a | 0.092 | mt-co2 | -0.057 |
| gtf2a1 | 0.090 | tbxta | -0.052 |
| si:ch73-299h12.2 | 0.087 | COX3 | -0.050 |
| cldnd | 0.087 | cdx4 | -0.047 |
| ptp4a2b | 0.084 | ube2e2 | -0.043 |
| ccna1 | 0.082 | wu:fb97g03 | -0.041 |
| alyref | 0.082 | myl12.1 | -0.040 |
| pum1 | 0.082 | hmgb2a | -0.039 |
| dnajc1 | 0.081 | ybx1 | -0.038 |
| dnajb1b | 0.081 | eve1 | -0.038 |
| zc3h13 | 0.081 | eef1a1l1 | -0.038 |
| epcam | 0.081 | wnt11f2 | -0.036 |
| ccng1 | 0.081 | mt-nd5 | -0.034 |
| nasp | 0.080 | LOC101884747 | -0.033 |
| prkrip1 | 0.080 | zgc:153018 | -0.033 |
| ctbp1 | 0.079 | dlb | -0.032 |
| lig1 | 0.079 | hes6 | -0.032 |
| pho | 0.078 | krt4 | -0.031 |
| blf | 0.078 | XLOC-016582 | -0.031 |
| brd3b | 0.078 | anp32e | -0.031 |
| ide | 0.077 | hspb1 | -0.031 |
| baz1b | 0.076 | polr3gla | -0.030 |
| hdgfl2 | 0.076 | rps5 | -0.030 |
| rbm7 | 0.075 | mt-cyb | -0.029 |
| si:ch211-161h7.4 | 0.075 | wnt5b | -0.029 |
| ywhaqa | 0.075 | LOC101884792 | -0.029 |
| thoc2 | 0.074 | LOC101886485 | -0.029 |
| top1l | 0.074 | apoc1 | -0.029 |
| vgll4l | 0.074 | slc25a43 | -0.028 |
| mkrn4 | 0.074 | rpsa | -0.028 |
| si:dkey-68o6.5 | 0.074 | hmgn2 | -0.028 |
| rtf1 | 0.074 | cnn3a | -0.028 |
| npc2 | 0.073 | cyt1 | -0.028 |
| prpf40a | 0.073 | XLOC-026578 | -0.027 |