| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| LOC100537384 | 0.603 | id1 | -0.303 |
| zfhx3 | 0.453 | XLOC-003690 | -0.292 |
| pik3r3b | 0.395 | mdka | -0.265 |
| elavl3 | 0.392 | cldn5a | -0.254 |
| myt1b | 0.372 | her15.1 | -0.252 |
| lhx1a | 0.369 | sox3 | -0.236 |
| zfhx4 | 0.342 | hmgb2a | -0.234 |
| gng2 | 0.340 | notch3 | -0.223 |
| elavl4 | 0.329 | vamp3 | -0.220 |
| tmsb | 0.328 | XLOC-003689 | -0.219 |
| nsg2 | 0.328 | zgc:56493 | -0.219 |
| stmn1b | 0.325 | msna | -0.216 |
| onecut1 | 0.323 | fosab | -0.216 |
| gng3 | 0.323 | sdc4 | -0.215 |
| zc4h2 | 0.319 | sparc | -0.208 |
| cplx2 | 0.319 | btg2 | -0.208 |
| sncb | 0.314 | msi1 | -0.205 |
| stx1b | 0.312 | COX7A2 (1 of many) | -0.202 |
| adam22 | 0.310 | her12 | -0.195 |
| si:ch73-386h18.1 | 0.310 | her4.1 | -0.194 |
| vamp2 | 0.307 | sox19a | -0.193 |
| inab | 0.304 | cd82a | -0.192 |
| stxbp1a | 0.304 | tuba8l4 | -0.189 |
| rtn1a | 0.303 | XLOC-003692 | -0.188 |
| ywhah | 0.301 | her4.2 | -0.185 |
| scrt2 | 0.286 | si:ch211-286b5.5 | -0.184 |
| syt2a | 0.286 | actb2 | -0.184 |
| golga7ba | 0.286 | ccng1 | -0.184 |
| csdc2a | 0.284 | selenoh | -0.184 |
| rtn1b | 0.284 | si:ch73-281n10.2 | -0.183 |
| epb41a | 0.283 | cd63 | -0.183 |
| si:dkeyp-75h12.5 | 0.281 | fabp7a | -0.183 |
| ndrg4 | 0.279 | atp1a1b | -0.182 |
| tmeff1b | 0.278 | sox2 | -0.181 |
| ube2ql1 | 0.277 | pcna | -0.180 |