Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| marco | 0.492 | hbae1.1 | -0.129 |
| si:dkey-5n18.1 | 0.492 | hbae3 | -0.124 |
| ctss2.2 | 0.482 | hbae1.3 | -0.123 |
| si:ch211-147m6.1 | 0.478 | hbbe1.3 | -0.122 |
| ctsl.1 | 0.471 | hbbe2 | -0.121 |
| mpeg1.1 | 0.465 | hbbe1.1 | -0.116 |
| havcr1 | 0.464 | cahz | -0.112 |
| si:ch211-194m7.3 | 0.462 | fth1a | -0.111 |
| cmklr1 | 0.460 | zgc:56095 | -0.108 |
| lgals2a | 0.438 | hemgn | -0.105 |
| c1qb | 0.438 | lmo2 | -0.105 |
| c1qc | 0.436 | hbbe1.2 | -0.105 |
| ccl34a.4 | 0.432 | si:ch211-250g4.3 | -0.098 |
| cx32.2 | 0.426 | alas2 | -0.097 |
| mfap4 | 0.421 | slc4a1a | -0.093 |
| lygl1 | 0.415 | nt5c2l1 | -0.090 |
| tnfb | 0.414 | epb41b | -0.088 |
| stoml3b | 0.405 | creg1 | -0.085 |
| NPC2 (1 of many) | 0.404 | zgc:163057 | -0.085 |
| ms4a17a.10 | 0.398 | si:ch211-207c6.2 | -0.083 |
| grna | 0.395 | aqp1a.1 | -0.083 |
| lgals3bpb | 0.384 | nmt1b | -0.081 |
| ctss2.1 | 0.376 | si:ch211-222l21.1 | -0.078 |
| nfkbiaa | 0.375 | blvrb | -0.077 |
| si:zfos-1069f5.1 | 0.371 | plac8l1 | -0.076 |
| c1qa | 0.370 | tspo | -0.075 |
| tspan36 | 0.369 | tmod4 | -0.074 |
| si:ch211-212k18.7 | 0.363 | histh1l | -0.074 |
| acod1 | 0.362 | arl4aa | -0.073 |
| slc3a2a | 0.361 | znfl2a | -0.072 |
| zgc:174904 | 0.361 | sptb | -0.072 |
| itgae.1 | 0.361 | anp32b | -0.071 |
| paox1 | 0.360 | hbae5 | -0.071 |
| ctsc | 0.360 | krt18a.1 | -0.071 |
| zgc:64065 | 0.359 | tfr1a | -0.070 |