Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| ALOXE3 | 0.113 | hmgb2a | -0.054 |
| olig1 | 0.112 | XLOC-003690 | -0.052 |
| aplnrb | 0.105 | her15.1 | -0.052 |
| si:dkey-71p21.13 | 0.099 | mdka | -0.051 |
| zgc:123244 | 0.093 | sox3 | -0.049 |
| CT573231.1 | 0.087 | id1 | -0.049 |
| RF00413 | 0.087 | si:dkey-151g10.6 | -0.048 |
| aplnra | 0.086 | hmgb2b | -0.047 |
| hcn4 | 0.086 | rplp2l | -0.047 |
| CU694256.1 | 0.079 | cldn5a | -0.047 |
| syt9b | 0.074 | rplp1 | -0.046 |
| zmp:0000001048 | 0.073 | rpl35a | -0.046 |
| zgc:101715 | 0.073 | ran | -0.045 |
| GRIK2 | 0.073 | XLOC-003689 | -0.045 |
| si:dkey-148a17.6 | 0.073 | rps11 | -0.044 |
| XLOC-018221 | 0.073 | rpl11 | -0.044 |
| tmem178b | 0.072 | rpl26 | -0.043 |
| LOC100535907 | 0.071 | rplp0 | -0.043 |
| c1ql4a | 0.071 | rps20 | -0.042 |
| dscama | 0.070 | her12 | -0.041 |
| gng3 | 0.070 | tspan7 | -0.041 |
| scg2b | 0.070 | rps7 | -0.041 |
| rtn1b | 0.069 | rpl12 | -0.041 |
| gabrb4 | 0.068 | rps19 | -0.041 |
| zgc:65894 | 0.068 | rpl13 | -0.041 |
| ntrk3b | 0.067 | her4.2 | -0.041 |
| kcnj11l | 0.067 | rpl27 | -0.040 |
| dscaml1 | 0.066 | rpl7 | -0.040 |
| tnr | 0.066 | rps14 | -0.040 |
| si:dkey-203a12.5 | 0.066 | sb:cb81 | -0.040 |
| FP102309.1 | 0.066 | faua | -0.039 |
| atp6v0cb | 0.065 | eef1a1l1 | -0.039 |
| gpm6ab | 0.065 | btg2 | -0.039 |
| taok3a | 0.065 | XLOC-003692 | -0.038 |
| stmn4l | 0.065 | rpl28 | -0.038 |