Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| muc5.2 | 0.815 | si:ch211-288g17.3 | -0.042 |
| muc5.1 | 0.617 | hmgb1b | -0.040 |
| si:dkey-65b12.6 | 0.610 | marcksb | -0.038 |
| BX649522.1 | 0.420 | marcksl1a | -0.037 |
| si:ch73-306e8.2 | 0.357 | nucks1a | -0.036 |
| fer1l6 | 0.354 | seta | -0.036 |
| p2rx1 | 0.332 | snrpf | -0.036 |
| BX000438.2 | 0.331 | hmgb3a | -0.035 |
| agr2 | 0.314 | snrpb | -0.035 |
| scin | 0.280 | sub1a | -0.035 |
| st6galnac1.1 | 0.266 | cbx3a | -0.034 |
| si:dkey-246j7.1 | 0.265 | ddx39ab | -0.034 |
| atp2a3 | 0.253 | si:dkey-56m19.5 | -0.034 |
| cysltr1 | 0.251 | msna | -0.033 |
| nansb | 0.249 | snrpd1 | -0.033 |
| si:ch73-359m17.9 | 0.238 | snrpd2 | -0.033 |
| galnt8b.1 | 0.219 | snrpe | -0.033 |
| galnt8b.2 | 0.219 | apex1 | -0.032 |
| mir375-2 | 0.218 | h2afva | -0.032 |
| sytl2b | 0.216 | pfn2l | -0.032 |
| si:dkey-1h24.2 | 0.214 | setb | -0.032 |
| rgs2 | 0.213 | hdac1 | -0.031 |
| cldnh | 0.199 | si:ch211-137a8.4 | -0.031 |
| b3gnt7 | 0.198 | snrpg | -0.031 |
| malb | 0.197 | hnrnpa0a | -0.030 |
| stard10 | 0.197 | idh2 | -0.030 |
| SPDEF | 0.196 | ilf2 | -0.030 |
| nipal4 | 0.195 | nova2 | -0.030 |
| grtp1b | 0.189 | si:ch211-51e12.7 | -0.030 |
| gpr55a | 0.186 | smarce1 | -0.030 |
| slc46a3 | 0.185 | top1l | -0.030 |
| ern2 | 0.182 | ewsr1a | -0.029 |
| si:dkey-193p11.2 | 0.181 | hp1bp3 | -0.029 |
| cracr2b | 0.179 | ilf3b | -0.029 |
| zgc:112433 | 0.179 | jpt1b | -0.029 |