Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| her15.1 | 0.078 | gapdhs | -0.042 |
| CU467822.1 | 0.078 | snap25b | -0.042 |
| LOC798783 | 0.074 | atp6v0cb | -0.040 |
| CU634008.1 | 0.073 | syt5b | -0.038 |
| XLOC-003692 | 0.070 | sypb | -0.038 |
| BX664610.1 | 0.070 | atp6v1e1b | -0.035 |
| XLOC-003690 | 0.067 | atp6ap2 | -0.034 |
| LOC100332834 | 0.067 | rs1a | -0.033 |
| her4.1 | 0.065 | atp5if1b | -0.031 |
| abhd6a | 0.064 | atp6v1g1 | -0.031 |
| si:ch211-209j12.1 | 0.063 | tpi1b | -0.031 |
| pou3f1 | 0.062 | calm1a | -0.030 |
| si:ch73-21g5.7 | 0.061 | sh3gl2a | -0.030 |
| XLOC-044290 | 0.060 | atpv0e2 | -0.030 |
| hmgn2 | 0.059 | tob1b | -0.030 |
| si:ch73-215f7.1 | 0.059 | tob1a | -0.029 |
| her4.2 | 0.059 | ppdpfb | -0.029 |
| notch1b | 0.059 | id2a | -0.029 |
| mdka | 0.059 | gng13b | -0.029 |
| LOC103909421 | 0.058 | vamp2 | -0.028 |
| hes6 | 0.058 | gnao1b | -0.028 |
| her12 | 0.058 | calb2b | -0.027 |
| hes2.2 | 0.057 | eno1a | -0.027 |
| notch3 | 0.056 | cplx4a | -0.027 |
| ncalda | 0.056 | pacsin1a | -0.027 |
| LOC101886429 | 0.055 | kdm6bb | -0.027 |
| XLOC-003689 | 0.055 | necap1 | -0.027 |
| sox18 | 0.054 | atp6v1h | -0.027 |
| cldn5b | 0.052 | ap2m1a | -0.026 |
| neu3.5 | 0.052 | gnb5b | -0.026 |
| si:ch211-222l21.1 | 0.052 | syngr1a | -0.026 |
| gadd45gb.1 | 0.050 | laptm4b | -0.026 |
| fabp7a | 0.049 | olfm1b | -0.026 |
| foxn4 | 0.049 | ndrg4 | -0.026 |
| her4.4 | 0.049 | calm2a | -0.026 |