Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| CR751602.2 | 0.124 | atp5if1b | -0.021 |
| fgfr3 | 0.082 | cfl1l | -0.021 |
| nr2f2 | 0.079 | epcam | -0.021 |
| XLOC-003690 | 0.077 | tuba8l2 | -0.020 |
| zgc:165461 | 0.075 | si:dkey-16p21.8 | -0.019 |
| sox3 | 0.068 | tmsb1 | -0.019 |
| XLOC-003689 | 0.068 | anxa1a | -0.018 |
| si:ch211-212k18.5 | 0.067 | cd9b | -0.018 |
| BX569787.1 | 0.065 | col1a1a | -0.018 |
| cldn5a | 0.065 | col1a2 | -0.018 |
| notch3 | 0.065 | fkbp7 | -0.018 |
| her2 | 0.064 | s100a10b | -0.018 |
| mir219-3 | 0.064 | ywhaz | -0.018 |
| robo4 | 0.063 | ckap4 | -0.017 |
| sox19a | 0.062 | col1a1b | -0.017 |
| nr2f1b | 0.060 | col2a1b | -0.017 |
| her15.1 | 0.060 | cyt1 | -0.017 |
| lfng | 0.059 | eef1da | -0.017 |
| plp1a | 0.059 | f11r.1 | -0.017 |
| msi1 | 0.058 | krt4 | -0.017 |
| her4.2 | 0.058 | krt5 | -0.017 |
| gpm6bb | 0.057 | pfn1 | -0.017 |
| nrarpb | 0.057 | zgc:162730 | -0.017 |
| XLOC-003692 | 0.057 | ahnak | -0.016 |
| zbtb16a | 0.056 | anxa2a | -0.016 |
| si:ch73-30b17.2 | 0.055 | arhgef5 | -0.016 |
| ek1 | 0.053 | cdh1 | -0.016 |
| abhd6a | 0.053 | icn | -0.016 |
| her4.4 | 0.052 | krtt1c19e | -0.016 |
| gfap | 0.051 | pmp22a | -0.016 |
| si:ch73-21g5.7 | 0.051 | prr13 | -0.016 |
| her4.1 | 0.050 | selenow1 | -0.016 |
| lrrn1 | 0.050 | wu:fb18f06 | -0.016 |
| nr2f1a | 0.050 | zgc:175088 | -0.016 |
| otx2a | 0.050 | col5a1 | -0.016 |