Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| BX901962.3 | 0.521 | tpt1 | -0.054 |
| rfesd | 0.484 | actb2 | -0.041 |
| cyth3b | 0.313 | NC-002333.17 | -0.033 |
| si:dkey-190j3.6 | 0.290 | NC-002333.4 | -0.033 |
| CR556696.1 | 0.281 | COX3 | -0.032 |
| pou1f1 | 0.263 | actb1 | -0.031 |
| zmiz1b | 0.242 | slc25a3b | -0.031 |
| dhrs7ca | 0.233 | tmsb4x | -0.030 |
| zdhhc3a | 0.193 | hnrnpa0l | -0.028 |
| cuzd1.1 | 0.188 | khdrbs1a | -0.028 |
| stra6 | 0.187 | atp5pb | -0.028 |
| dnase1 | 0.178 | ssr3 | -0.027 |
| mir454b | 0.175 | ctsla | -0.027 |
| si:ch211-232i5.1 | 0.175 | h3f3c | -0.027 |
| SP5 (1 of many) | 0.174 | ldhba | -0.027 |
| ttc22 | 0.174 | acin1a | -0.027 |
| akip1 | 0.173 | hmgn7 | -0.026 |
| garem | 0.169 | smndc1 | -0.026 |
| emsy | 0.168 | hsbp1b | -0.026 |
| rasd3 | 0.157 | marcksl1b | -0.025 |
| CU469524.1 | 0.156 | setb | -0.025 |
| rpp30 | 0.153 | srsf5a | -0.025 |
| prf1.7 | 0.152 | atp5f1b | -0.025 |
| LOC108181504 | 0.152 | nucks1a | -0.024 |
| scrn2 | 0.151 | wu:fb55g09 | -0.024 |
| allc | 0.151 | si:ch73-281n10.2 | -0.024 |
| nsdhl | 0.145 | hmgb2b | -0.024 |
| adgrf6 | 0.145 | tubb4b | -0.024 |
| XLOC-016546 | 0.139 | ssr4 | -0.024 |
| eps15 | 0.138 | cox6a1 | -0.024 |
| si:cabz01101003.1 | 0.136 | ubb | -0.024 |
| LOC103911473 | 0.136 | atp5l | -0.024 |
| XLOC-032136 | 0.132 | histh1l | -0.023 |
| pcolce2b | 0.131 | hnrnpa0b | -0.023 |
| tbx3b | 0.129 | si:ch211-222l21.1 | -0.023 |