Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| col6a3 | 0.159 | ddx39ab | -0.024 |
| col6a2 | 0.133 | snrpd1 | -0.024 |
| col6a1 | 0.132 | her15.1 | -0.024 |
| col6a4a | 0.115 | apex1 | -0.023 |
| fmoda | 0.107 | cct4 | -0.023 |
| pdgfrl | 0.107 | cct7 | -0.023 |
| col5a1 | 0.102 | snrpf | -0.023 |
| col5a2a | 0.101 | si:ch211-137a8.4 | -0.022 |
| si:ch1073-459j12.1 | 0.098 | snrpe | -0.022 |
| col1a2 | 0.091 | tcp1 | -0.022 |
| col1a1b | 0.088 | XLOC-003690 | -0.022 |
| dcn | 0.088 | alyref | -0.021 |
| pmp22a | 0.086 | cct3 | -0.021 |
| lum | 0.085 | cct5 | -0.021 |
| mxra8b | 0.084 | ilf2 | -0.021 |
| fgl1 | 0.083 | setb | -0.021 |
| mfap2 | 0.080 | snrpb | -0.021 |
| krt18b | 0.078 | XLOC-003689 | -0.021 |
| col1a1a | 0.076 | hmgb3b | -0.020 |
| mmp14a | 0.076 | snrpd2 | -0.020 |
| vwde | 0.076 | snrpg | -0.020 |
| serpinf1 | 0.075 | XLOC-003692 | -0.020 |
| col11a1b | 0.074 | cct6a | -0.019 |
| fstl1b | 0.074 | msi1 | -0.019 |
| FQ378018.1 | 0.073 | ptges3b | -0.019 |
| tril | 0.073 | sf3b5 | -0.019 |
| entpd1 | 0.071 | aldoaa | -0.018 |
| twist1a | 0.071 | cdkn2aipnl | -0.018 |
| lrrc17 | 0.070 | cycsb | -0.018 |
| zgc:113307 | 0.070 | ddx39aa | -0.018 |
| col12a1a | 0.069 | eif4a1a | -0.018 |
| fap | 0.069 | eif4a3 | -0.018 |
| antxr2a | 0.068 | hdac1 | -0.018 |
| col12a1b | 0.067 | hes6 | -0.018 |
| si:ch211-106h4.12 | 0.067 | magoh | -0.018 |