Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| slc16a8 | 0.171 | hmga1a | -0.039 |
| slc16a1a | 0.166 | hmgn2 | -0.037 |
| slc13a4 | 0.164 | ptmab | -0.037 |
| rdh20 | 0.163 | si:ch211-222l21.1 | -0.036 |
| lratb.2 | 0.161 | hnrnpaba | -0.034 |
| rbp1 | 0.161 | khdrbs1a | -0.034 |
| cidea | 0.160 | rplp2l | -0.033 |
| rdh5 | 0.159 | ran | -0.033 |
| rpe65a | 0.158 | si:dkey-151g10.6 | -0.033 |
| selenou1b | 0.157 | h2afvb | -0.033 |
| lrata | 0.153 | rplp1 | -0.032 |
| pip4k2cb | 0.149 | h3f3d | -0.032 |
| mfge8a | 0.145 | hmgb2b | -0.031 |
| inpp5kb | 0.144 | rps26l | -0.030 |
| tm4sf18 | 0.144 | rps13 | -0.030 |
| pla1a | 0.142 | hnrnpabb | -0.029 |
| slc2a1a | 0.141 | si:ch73-1a9.3 | -0.029 |
| slc39a4 | 0.140 | cirbpa | -0.028 |
| inpp5ka | 0.139 | rps9 | -0.028 |
| rlbp1b | 0.139 | snrpe | -0.028 |
| tm6sf2 | 0.138 | snrpf | -0.027 |
| gltpd2 | 0.137 | marcksb | -0.027 |
| rgra | 0.137 | seta | -0.027 |
| oatx | 0.137 | h3f3a | -0.027 |
| rgrb | 0.137 | cct3 | -0.026 |
| ugt5e1 | 0.135 | fabp7a | -0.026 |
| cebpa | 0.134 | rps26 | -0.026 |
| pttg1ipb | 0.132 | rpl29 | -0.026 |
| si:ch211-236l14.4 | 0.131 | hmgn6 | -0.026 |
| slc22a5 | 0.129 | serbp1a | -0.026 |
| tmem72 | 0.128 | eef1b2 | -0.026 |
| stra6 | 0.128 | snrpb | -0.025 |
| pip5k1ba | 0.128 | rps14 | -0.025 |
| slc13a3 | 0.128 | snrpd2 | -0.025 |
| sod3a | 0.128 | ilf2 | -0.025 |