Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pou5f3 | 0.200 | si:ch1073-429i10.3.1 | -0.072 |
| si:ch1073-80i24.3 | 0.187 | calm1a | -0.069 |
| polr3gla | 0.185 | ccni | -0.065 |
| nnr | 0.179 | gapdhs | -0.062 |
| asb11 | 0.177 | rnasekb | -0.061 |
| stm | 0.172 | tuba1c | -0.061 |
| s100a1 | 0.170 | hbbe1.3 | -0.060 |
| si:dkey-228b2.6 | 0.165 | gpm6aa | -0.059 |
| zgc:56699 | 0.165 | atp6v0cb | -0.058 |
| si:ch211-152c2.3 | 0.161 | hbae3 | -0.058 |
| si:dkey-66i24.9 | 0.161 | rtn1a | -0.058 |
| lrwd1 | 0.157 | marcksl1a | -0.057 |
| si:dkeyp-114g9.1 | 0.156 | atp6v1g1 | -0.056 |
| LOC100008030 | 0.151 | atp6v1e1b | -0.055 |
| LOC108190024 | 0.150 | krt4 | -0.055 |
| tbx16 | 0.150 | stmn1b | -0.055 |
| hspb1 | 0.149 | hbae1.1 | -0.054 |
| vrtn | 0.149 | gng3 | -0.053 |
| add3b | 0.146 | pvalb1 | -0.053 |
| h1m | 0.144 | cyt1 | -0.052 |
| si:ch211-173m16.2 | 0.144 | gpm6ab | -0.052 |
| si:dkey-68o6.5 | 0.142 | wu:fb55g09 | -0.052 |
| foxd5 | 0.141 | pvalb2 | -0.051 |
| si:dkey-92i17.2 | 0.141 | sncb | -0.051 |
| vox | 0.140 | vamp2 | -0.051 |
| dkc1 | 0.139 | atp6ap2 | -0.049 |
| fbl | 0.139 | elavl3 | -0.049 |
| avd | 0.138 | gabarapl2 | -0.049 |
| polr2gl | 0.138 | hbbe1.1 | -0.049 |
| ved | 0.137 | ckbb | -0.048 |
| zic2b | 0.136 | fam168a | -0.048 |
| foxh1 | 0.135 | ywhag2 | -0.048 |
| ddx4 | 0.134 | zgc:56493 | -0.048 |
| nop58 | 0.134 | atpv0e2 | -0.047 |
| hnrnpa1b | 0.133 | cyt1l | -0.047 |