Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| or131-1 | 0.154 | fibina | -0.024 |
| pcyt1bb | 0.128 | hmgn2 | -0.023 |
| si:dkey-266f7.10 | 0.121 | hapln1a | -0.022 |
| LOC108183685 | 0.109 | hmgb3a | -0.022 |
| XLOC-007524 | 0.105 | foxc1b | -0.020 |
| CABZ01078734.1 | 0.103 | cthrc1a | -0.020 |
| mmp11a | 0.094 | hmgb1a | -0.020 |
| grem1a | 0.094 | col9a1a | -0.020 |
| agrp | 0.090 | col2a1a | -0.019 |
| si:dkey-111i23.1 | 0.086 | col9a3 | -0.019 |
| cpb2 | 0.086 | col9a2 | -0.019 |
| LOC110439846 | 0.080 | cnmd | -0.019 |
| CR848791.1 | 0.078 | rpl22l1 | -0.019 |
| si:dkey-9p24.5 | 0.078 | sox9a | -0.019 |
| dpep2 | 0.077 | zgc:153409 | -0.019 |
| LOC101884710 | 0.074 | si:ch211-288g17.3 | -0.018 |
| BX248410.3 | 0.073 | foxc1a | -0.017 |
| cd151 | 0.073 | idh2 | -0.017 |
| tmem88b | 0.073 | tgfbi | -0.017 |
| si:dkeyp-46h3.6 | 0.073 | snrpd1 | -0.017 |
| si:ch211-243a20.3 | 0.072 | apex1 | -0.017 |
| rhag | 0.072 | hmgb2b | -0.017 |
| BX682234.1 | 0.071 | snrpe | -0.016 |
| cavin2b | 0.070 | CU929237.1 | -0.016 |
| leg1.2 | 0.070 | COX3 | -0.016 |
| adamts15a | 0.069 | prmt1 | -0.016 |
| arl4aa | 0.069 | sult6b1 | -0.016 |
| ccdc3a | 0.066 | hmga1a | -0.016 |
| amfrb | 0.066 | chd4a | -0.016 |
| hoxb13a | 0.065 | seta | -0.016 |
| col7a1l | 0.064 | nop56 | -0.015 |
| notum1b | 0.063 | cspg4 | -0.015 |
| LOC103911301 | 0.062 | tnc | -0.015 |
| mylk3 | 0.062 | foxd1 | -0.015 |
| foxi3b | 0.061 | ptmaa | -0.015 |