Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| krtt1c19e | 0.079 | hmgb1b | -0.034 |
| wu:fa03e10 | 0.077 | si:ch211-288g17.3 | -0.032 |
| krt5 | 0.076 | marcksb | -0.031 |
| pycard | 0.072 | h2afva | -0.028 |
| cfl1l | 0.071 | hmgb3a | -0.028 |
| si:dkey-33c14.3 | 0.071 | nucks1a | -0.028 |
| cyt1 | 0.070 | hnrnpa0a | -0.026 |
| rhbg | 0.069 | pfn2l | -0.026 |
| anxa1a | 0.067 | seta | -0.026 |
| krt4 | 0.067 | si:dkey-56m19.5 | -0.026 |
| s100a10b | 0.066 | marcksl1a | -0.026 |
| aep1 | 0.065 | cbx3a | -0.025 |
| cyt1l | 0.064 | hdac1 | -0.025 |
| foxq1a | 0.064 | hp1bp3 | -0.025 |
| pnp5a | 0.064 | si:ch211-137a8.4 | -0.025 |
| si:ch211-105c13.3 | 0.064 | ddx39ab | -0.024 |
| pfn1 | 0.063 | ilf2 | -0.024 |
| tmsb1 | 0.063 | nova2 | -0.024 |
| wu:fb18f06 | 0.063 | setb | -0.024 |
| caspb | 0.062 | snrpd1 | -0.024 |
| si:rp71-77l1.1 | 0.062 | snrpe | -0.024 |
| tmem238a | 0.062 | tuba1c | -0.024 |
| zgc:175088 | 0.062 | alyref | -0.023 |
| capns1a | 0.061 | apex1 | -0.023 |
| zgc:153284 | 0.061 | cx43.4 | -0.023 |
| si:ch211-166a6.5 | 0.060 | fabp3 | -0.023 |
| si:dkey-247k7.2 | 0.060 | ilf3b | -0.023 |
| DSG2 | 0.059 | smarce1 | -0.023 |
| si:ch211-207n23.2 | 0.059 | snrpd2 | -0.023 |
| arhgef5 | 0.058 | snrpf | -0.023 |
| cebpb | 0.058 | top1l | -0.023 |
| epcam | 0.058 | tuba1a | -0.023 |
| itm2bb | 0.058 | ewsr1a | -0.022 |
| pkp3a | 0.058 | hnrnpub | -0.022 |
| tmem176l.4 | 0.058 | jpt1b | -0.022 |