Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| col1a1a | 0.182 | khdrbs1a | -0.109 |
| col11a1a | 0.180 | h2afva | -0.104 |
| col1a1b | 0.174 | ran | -0.103 |
| col1a2 | 0.172 | snrpd1 | -0.103 |
| col2a1b | 0.169 | ddx39ab | -0.102 |
| postnb | 0.166 | rpl10a | -0.100 |
| cavin1b | 0.153 | snrpf | -0.099 |
| aep1 | 0.152 | h2afvb | -0.099 |
| col4a5 | 0.150 | setb | -0.098 |
| sparc | 0.148 | hnrnpabb | -0.098 |
| col5a1 | 0.148 | rps5 | -0.097 |
| cotl1 | 0.147 | faua | -0.097 |
| lamb4 | 0.146 | rps20 | -0.097 |
| col4a6 | 0.144 | rps9 | -0.096 |
| col14a1b | 0.142 | rps23 | -0.096 |
| VIT | 0.141 | snrpe | -0.095 |
| aqp3a | 0.140 | hnrnpa0l | -0.095 |
| pleca | 0.140 | hnrnpaba | -0.095 |
| col7a1 | 0.139 | hmgb2b | -0.095 |
| flna | 0.139 | rpl12 | -0.095 |
| itgb1b.2 | 0.137 | hsp90ab1 | -0.094 |
| pfn1 | 0.137 | anp32b | -0.094 |
| col5a3b | 0.137 | cirbpb | -0.093 |
| itgb3a | 0.136 | snrpd2 | -0.093 |
| s100a10b | 0.136 | rps15a | -0.093 |
| col12a1b | 0.135 | h3f3d | -0.092 |
| hcls1 | 0.135 | rpl26 | -0.092 |
| col18a1a | 0.134 | rpl21 | -0.091 |
| itgb1b.1 | 0.134 | apex1 | -0.091 |
| cldn1 | 0.134 | rpl23 | -0.091 |
| col16a1 | 0.133 | atp5if1a | -0.091 |
| DSG2 | 0.133 | snrpg | -0.090 |
| itgb4 | 0.132 | cdkn2aipnl | -0.090 |
| plecb | 0.131 | hnrnpa0b | -0.090 |
| myh9a | 0.130 | ddx39aa | -0.090 |