Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| slc22a16 | 0.543 | ptmaa | -0.070 |
| XLOC-039021 | 0.487 | cox7a2a | -0.044 |
| trhde.2 | 0.419 | elavl3 | -0.042 |
| slc1a6 | 0.411 | ubc | -0.038 |
| XLOC-009558 | 0.398 | hsbp1b | -0.037 |
| XLOC-010247 | 0.365 | sumo2b | -0.036 |
| pcdh1g18 | 0.339 | COX5B | -0.036 |
| hspb6 | 0.338 | rtn1a | -0.035 |
| kcnk3b | 0.336 | cirbpb | -0.035 |
| cart4 | 0.326 | sub1a | -0.035 |
| trhra | 0.315 | ndufb8 | -0.035 |
| cntnap5l | 0.314 | insm1a | -0.035 |
| si:ch211-171h4.6 | 0.303 | psmb7 | -0.034 |
| xkr6a | 0.297 | mt-nd1 | -0.034 |
| znf1175 | 0.295 | eif2s2 | -0.034 |
| igsf9b | 0.285 | gnb1a | -0.033 |
| CDH18 | 0.284 | insm1b | -0.033 |
| aplnr2 | 0.278 | alyref | -0.033 |
| LOC108192140 | 0.277 | polr2d | -0.033 |
| si:ch73-252i11.1 | 0.259 | sem1 | -0.033 |
| si:dkey-76k16.5 | 0.252 | pa2g4a | -0.033 |
| LOC100007824 | 0.247 | si:ch73-1a9.3 | -0.032 |
| si:ch73-281f12.4 | 0.246 | nipsnap2 | -0.032 |
| XLOC-011085 | 0.245 | si:dkey-276j7.1 | -0.032 |
| fam20ca | 0.239 | cox6c | -0.032 |
| lrp1bb | 0.236 | hnrnpa0l | -0.031 |
| galca | 0.220 | tmsb4x | -0.031 |
| antxr1c | 0.214 | CU467822.1 | -0.031 |
| KCNJ6 | 0.209 | mt-cyb | -0.031 |
| atp9b | 0.201 | hmgb2a | -0.030 |
| rgs6 | 0.201 | uqcrh | -0.030 |
| LOC108183728 | 0.199 | adcyap1b | -0.030 |
| XLOC-009557 | 0.196 | atp5mc1 | -0.030 |
| c6 | 0.196 | uncx | -0.030 |
| BX005438.1 | 0.196 | tomm40l | -0.030 |