Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| vcana | 0.479 | si:dkey-222f2.1 | -0.139 |
| vcanb | 0.464 | six1b | -0.137 |
| cyr61l1 | 0.415 | eya1 | -0.130 |
| si:dkeyp-44a8.4 | 0.332 | si:ch211-152c2.3 | -0.115 |
| tmprss5 | 0.331 | ran | -0.093 |
| XLOC-029386 | 0.296 | si:ch211-243g18.2 | -0.090 |
| chsy1 | 0.293 | prdx2 | -0.086 |
| sb:cb1058 | 0.291 | her15.1 | -0.084 |
| LOC100333572 | 0.274 | tuba8l4 | -0.083 |
| lmx1ba | 0.272 | sox2 | -0.077 |
| rgs6 | 0.269 | her4.1 | -0.074 |
| serpinh1b | 0.263 | hmgb2a | -0.071 |
| BX005183.3 | 0.255 | phlda2 | -0.071 |
| col11a2 | 0.246 | eya4 | -0.070 |
| asip2b | 0.245 | hspa8 | -0.069 |
| rasl11b | 0.244 | hsp90ab1 | -0.068 |
| metrnla | 0.243 | ptmaa | -0.068 |
| matn4 | 0.242 | snrpd1 | -0.066 |
| esrrb | 0.238 | ywhaqa | -0.065 |
| fkbp7 | 0.237 | hmgn3 | -0.065 |
| LOC100149247 | 0.236 | cirbpa | -0.065 |
| col9a3 | 0.230 | si:ch211-195b13.1 | -0.065 |
| sfrp5 | 0.229 | hes6 | -0.064 |
| CR381618.1 | 0.228 | igsf9a | -0.063 |
| col9a1b | 0.228 | gsnb | -0.063 |
| LOC100534722 | 0.224 | mcl1a | -0.062 |
| col9a1a | 0.223 | ddx39ab | -0.062 |
| wnt3 | 0.221 | sap18 | -0.062 |
| XLOC-016463 | 0.219 | calm1b | -0.062 |
| LOC110440051 | 0.216 | eif3k | -0.061 |
| phldb1a | 0.215 | fgf10a | -0.061 |
| col11a1a | 0.214 | btf3 | -0.060 |
| hmx4 | 0.213 | hmgb2b | -0.060 |
| wnt2 | 0.213 | krt18b | -0.060 |
| col2a1a | 0.212 | cnbpb | -0.060 |