Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| optc | 0.204 | fabp3 | -0.045 |
| col9a3 | 0.197 | ptmaa | -0.043 |
| emilin3a | 0.193 | ptmab | -0.037 |
| ctgfa | 0.185 | hmgb3a | -0.037 |
| npr3 | 0.179 | hnrnpaba | -0.037 |
| b3gnt7l | 0.177 | elavl3 | -0.037 |
| col8a1a | 0.176 | si:ch211-137a8.4 | -0.036 |
| aplnr2 | 0.174 | tmsb4x | -0.035 |
| col9a1b | 0.172 | nova2 | -0.035 |
| spon2a | 0.165 | hmgb1b | -0.034 |
| col9a2 | 0.162 | sox3 | -0.033 |
| col2a1b | 0.158 | rtn1a | -0.033 |
| slit1b | 0.149 | prdx2 | -0.030 |
| col2a1a | 0.147 | si:dkey-56m19.5 | -0.030 |
| scospondin | 0.147 | mdkb | -0.030 |
| cyr61l2 | 0.145 | marcksb | -0.029 |
| anxa4 | 0.145 | tmeff1b | -0.029 |
| sulf1 | 0.143 | sox11b | -0.029 |
| myl9a | 0.142 | apex1 | -0.029 |
| plod2 | 0.141 | ckbb | -0.028 |
| mkxb | 0.139 | lfng | -0.028 |
| si:ch211-153l6.6 | 0.139 | si:ch73-21g5.7 | -0.028 |
| phldb2b | 0.136 | mex3b | -0.027 |
| fxyd1 | 0.133 | CU467822.1 | -0.027 |
| lcn15 | 0.133 | hmgb1a | -0.027 |
| trabd2b | 0.132 | hnrnph1l | -0.027 |
| chst6 | 0.132 | chd4a | -0.027 |
| LOC101885645 | 0.132 | tmsb | -0.026 |
| rrbp1b | 0.131 | myt1b | -0.026 |
| oc90 | 0.130 | nme2b.1 | -0.026 |
| BX908782.3 | 0.130 | tmpob | -0.026 |
| clu | 0.130 | FO082781.1 | -0.025 |
| arxa | 0.129 | stmn1b | -0.025 |
| lamb1a | 0.125 | myt1a | -0.025 |
| f2rl2 | 0.123 | fxyd6l | -0.025 |