Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tbx6 | 0.464 | ier2b | -0.030 |
| c4b | 0.310 | btg2 | -0.026 |
| cfap57 | 0.301 | si:dkey-33c14.3 | -0.025 |
| gpib | 0.295 | pfdn4 | -0.025 |
| scg5 | 0.288 | cdo1 | -0.025 |
| si:dkey-188i13.8 | 0.277 | tmsb4x | -0.023 |
| LOC100334054 | 0.245 | s100v2 | -0.023 |
| LOC108179070 | 0.243 | oaz1b | -0.023 |
| prg4b | 0.240 | csnk1a1 | -0.023 |
| LOC100333474 | 0.235 | denr | -0.023 |
| esm1 | 0.225 | fxyd6l | -0.023 |
| si:ch211-247n2.1 | 0.220 | cyt1 | -0.023 |
| LOC108179808 | 0.218 | ubc | -0.023 |
| XLOC-011126 | 0.214 | im:7150988 | -0.023 |
| rnf212b | 0.214 | dynll1 | -0.022 |
| slc16a9a | 0.208 | actn4 | -0.022 |
| si:dkey-57c22.1 | 0.205 | zgc:193541 | -0.022 |
| znf831 | 0.205 | cfl1l | -0.022 |
| hamp | 0.204 | itm2bb | -0.022 |
| c3a.1 | 0.197 | tuba8l | -0.021 |
| XLOC-008303 | 0.197 | pabpn1 | -0.021 |
| CU929312.1 | 0.196 | epcam | -0.021 |
| zgc:113142 | 0.191 | cyt1l | -0.021 |
| itln1 | 0.187 | dlx3b | -0.021 |
| cfap161 | 0.182 | capns1b | -0.021 |
| LOC103909195 | 0.178 | cebpb | -0.021 |
| znf1164 | 0.175 | col1a2 | -0.021 |
| si:cabz01071907.1 | 0.170 | krt5 | -0.021 |
| XLOC-008391 | 0.168 | tmsb1 | -0.021 |
| CABZ01075572.1 | 0.165 | jdp2b | -0.021 |
| AL845365.1 | 0.165 | histh1l | -0.021 |
| si:dkey-174i8.1 | 0.162 | pfn1 | -0.021 |
| znf45l | 0.158 | tpm3 | -0.021 |
| vcam1b | 0.158 | ywhaba | -0.020 |
| itga11b | 0.157 | anxa2a | -0.020 |