Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| BX000522.1 | 0.734 | actb1 | -0.042 |
| CU207217.1 | 0.734 | col1a1b | -0.031 |
| XLOC-043390 | 0.734 | col5a1 | -0.031 |
| si:ch211-27e6.1 | 0.701 | myl9b | -0.031 |
| htr3b | 0.620 | ubb | -0.029 |
| htr3a | 0.585 | col5a2a | -0.029 |
| CR361560.1 | 0.533 | ccng1 | -0.028 |
| XLOC-007906 | 0.533 | pfn1 | -0.027 |
| waif2 | 0.530 | col6a2 | -0.026 |
| b4galnt4b | 0.466 | tuba8l | -0.026 |
| itpr1b | 0.441 | ahnak | -0.026 |
| p2rx2 | 0.403 | col6a1 | -0.026 |
| LOC101885837 | 0.403 | krt18a.1 | -0.026 |
| LOC103910167 | 0.403 | tspan7 | -0.025 |
| zgc:113142 | 0.403 | col1a2 | -0.025 |
| slc44a5a | 0.379 | foxf1 | -0.025 |
| fbxl3l | 0.361 | tmem176 | -0.024 |
| phox2a | 0.358 | hmga2 | -0.024 |
| kif19 | 0.345 | actb2 | -0.024 |
| ACVR1C | 0.341 | cox7b | -0.024 |
| cers3b | 0.327 | tagln | -0.024 |
| RF00560 | 0.325 | flot1b | -0.023 |
| nes | 0.320 | hdlbpa | -0.023 |
| scn5lab | 0.317 | ndufc2 | -0.023 |
| XLOC-022924 | 0.307 | ostc | -0.023 |
| BX950205.1 | 0.302 | meis1a | -0.023 |
| gga3b | 0.289 | mt-nd1 | -0.022 |
| c1ql4a | 0.289 | hbae3 | -0.022 |
| trarg1b | 0.287 | glud1a | -0.022 |
| kcnk1a | 0.276 | zgc:162944 | -0.022 |
| LOC100334054 | 0.255 | cnn2 | -0.022 |
| acy3.1 | 0.253 | ckba | -0.022 |
| XLOC-040753 | 0.251 | foxf2a | -0.022 |
| phox2bb | 0.247 | ndufb6 | -0.022 |
| stxbp5l | 0.235 | calua | -0.021 |