Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| slc16a1a | 0.319 | si:ch73-1a9.3 | -0.091 |
| tm4sf18 | 0.313 | ptmab | -0.084 |
| slc13a4 | 0.312 | hmgn6 | -0.065 |
| slc16a8 | 0.306 | hnrnpaba | -0.063 |
| lratb.2 | 0.305 | hmgn2 | -0.062 |
| rdh5 | 0.303 | h3f3d | -0.062 |
| rpe65a | 0.296 | ptmaa | -0.058 |
| lpar4 | 0.293 | si:ch211-222l21.1 | -0.056 |
| slc13a3 | 0.290 | marcksl1b | -0.051 |
| lrata | 0.289 | marcksl1a | -0.050 |
| acsl3a | 0.288 | hmgb1b | -0.050 |
| selenou1b | 0.287 | si:ch211-288g17.3 | -0.050 |
| tm6sf2 | 0.285 | fabp3 | -0.048 |
| inpp5kb | 0.283 | gpm6aa | -0.048 |
| pip4k2cb | 0.276 | h2afvb | -0.048 |
| rbp1 | 0.276 | sumo3a | -0.047 |
| oatx | 0.274 | khdrbs1a | -0.047 |
| rdh20 | 0.274 | hmgb2b | -0.044 |
| cidea | 0.274 | h3f3a | -0.043 |
| mfge8a | 0.272 | marcksb | -0.043 |
| si:ch211-236l14.4 | 0.268 | tuba1c | -0.043 |
| inpp5ka | 0.264 | nova2 | -0.042 |
| rlbp1b | 0.263 | hmga1a | -0.041 |
| rgrb | 0.262 | setb | -0.040 |
| ephx1 | 0.262 | hnrnpa0b | -0.040 |
| tmem72 | 0.261 | si:ch73-281n10.2 | -0.040 |
| ugt5e1 | 0.261 | cirbpb | -0.040 |
| stra6 | 0.261 | zgc:153409 | -0.039 |
| rgra | 0.259 | tuba1a | -0.039 |
| gltpd2 | 0.257 | hnrnpabb | -0.038 |
| slc39a4 | 0.257 | mdkb | -0.037 |
| slc2a1a | 0.257 | si:ch211-137a8.4 | -0.037 |
| slc22a5 | 0.257 | cirbpa | -0.037 |
| sod3a | 0.255 | hmgb3a | -0.036 |
| shhb | 0.251 | snrpd1 | -0.036 |