Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| foxd5 | 0.562 | hmgn7 | -0.038 |
| dtwd2 | 0.357 | cox6a1 | -0.030 |
| si:ch1073-340j19.1 | 0.312 | h3f3c | -0.028 |
| zgc:173742 | 0.307 | mt-nd2 | -0.026 |
| sash3 | 0.289 | dad1 | -0.026 |
| CU457819.4 | 0.287 | syncrip | -0.025 |
| LOC101885506 | 0.257 | six1b | -0.025 |
| XLOC-004546 | 0.257 | serf2 | -0.024 |
| ccl34b.1 | 0.254 | psmb7 | -0.024 |
| LOC100330188 | 0.233 | hmgb3a | -0.023 |
| LOC110438349 | 0.214 | mt-co2 | -0.022 |
| LOC101882402 | 0.188 | ube2d2 | -0.022 |
| wdr90 | 0.184 | ddx5 | -0.022 |
| zgc:162144 | 0.184 | foxp4 | -0.022 |
| diaph3 | 0.162 | si:ch211-288g17.3 | -0.022 |
| si:ch211-207i20.2 | 0.154 | LOC110439372 | -0.021 |
| gnpat | 0.152 | id1 | -0.021 |
| hist2h3c | 0.143 | oaz1a | -0.021 |
| egfl6 | 0.137 | copz1 | -0.021 |
| cenpj | 0.135 | aldoaa | -0.021 |
| casp3b | 0.135 | sparc | -0.021 |
| hist1h4l.3 | 0.134 | mt-nd4 | -0.021 |
| setd6 | 0.132 | anp32b | -0.021 |
| camsap1a | 0.130 | dynlrb1 | -0.021 |
| pafah1b2 | 0.128 | si:ch211-51e12.7 | -0.021 |
| LRRC75A | 0.123 | hnrnpa0a | -0.020 |
| pigu | 0.123 | cdc37 | -0.020 |
| mipb | 0.121 | api5 | -0.020 |
| slc5a3b | 0.117 | eif3ha | -0.020 |
| chic1 | 0.117 | paip2b | -0.020 |
| lrrfip1a | 0.117 | seta | -0.020 |
| strn | 0.116 | h2afy2 | -0.020 |
| bin1b | 0.114 | bsg | -0.020 |
| polr1b | 0.113 | mt-nd5 | -0.020 |
| camk2d1 | 0.111 | lsm7 | -0.020 |