Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| si:dkey-105h12.2 | 0.223 | hmgb1b | -0.038 |
| c3a.3 | 0.222 | hmgb3a | -0.036 |
| f5 | 0.222 | jpt1b | -0.033 |
| c3a.6 | 0.221 | marcksb | -0.033 |
| sb:cb37 | 0.221 | tuba1c | -0.033 |
| serpina7 | 0.221 | hnrnpa0a | -0.032 |
| si:ch211-186e20.7 | 0.221 | nova2 | -0.032 |
| si:ch211-170d8.5 | 0.218 | nucks1a | -0.031 |
| a2ml | 0.217 | gpm6aa | -0.030 |
| c5 | 0.217 | si:ch211-288g17.3 | -0.030 |
| c8a | 0.217 | mdkb | -0.029 |
| f9b | 0.217 | rtn1a | -0.029 |
| g6pca.1 | 0.217 | tuba1a | -0.029 |
| itih3b | 0.217 | h2afva | -0.028 |
| itih3a | 0.216 | si:ch73-46j18.5 | -0.028 |
| serpinf2a | 0.216 | tmeff1b | -0.028 |
| zgc:112265 | 0.215 | atp6v0cb | -0.027 |
| cfh | 0.214 | gpm6ab | -0.027 |
| cpb2 | 0.214 | hdac1 | -0.027 |
| shbg | 0.214 | hp1bp3 | -0.027 |
| zgc:153913 | 0.214 | si:ch211-133n4.4 | -0.027 |
| c3a.1 | 0.212 | si:ch211-137a8.4 | -0.027 |
| cfb | 0.212 | tubb5 | -0.027 |
| comtd1 | 0.212 | vdac1 | -0.027 |
| fga | 0.212 | marcksl1a | -0.027 |
| si:ch211-288g17.4 | 0.212 | atrx | -0.026 |
| agt | 0.211 | elavl3 | -0.026 |
| proca | 0.211 | fam168a | -0.026 |
| si:ch1073-126c3.2 | 0.211 | rnasekb | -0.026 |
| cfhl4 | 0.210 | smarce1 | -0.026 |
| miox | 0.210 | zc4h2 | -0.026 |
| si:ch211-113d11.5 | 0.210 | h2afy2 | -0.025 |
| si:ch73-281k2.5 | 0.210 | pbx4 | -0.025 |
| si:dkey-90m5.4 | 0.210 | si:dkey-276j7.1 | -0.025 |
| cbln9 | 0.210 | acin1a | -0.024 |