Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| fgl1 | 0.072 | nova2 | -0.017 |
| si:ch211-287a12.9 | 0.068 | si:ch211-137a8.4 | -0.016 |
| fmoda | 0.067 | XLOC-003690 | -0.015 |
| vwde | 0.066 | XLOC-003689 | -0.014 |
| csf1b | 0.063 | gpm6aa | -0.013 |
| thbs4b | 0.060 | mdkb | -0.013 |
| pdgfrl | 0.057 | her15.1 | -0.013 |
| cilp | 0.055 | dla | -0.012 |
| col6a3 | 0.053 | fabp7a | -0.012 |
| fbln7 | 0.053 | msi1 | -0.012 |
| rbp7b | 0.053 | tuba1a | -0.012 |
| col6a2 | 0.052 | tuba1c | -0.012 |
| col6a1 | 0.051 | XLOC-003692 | -0.012 |
| csf1a | 0.051 | abhd6a | -0.012 |
| FQ378018.1 | 0.051 | cldn5a | -0.011 |
| col6a4a | 0.050 | elavl3 | -0.011 |
| entpd1 | 0.050 | epb41a | -0.011 |
| smoc1 | 0.050 | her12 | -0.011 |
| si:ch1073-459j12.1 | 0.049 | myt1a | -0.011 |
| tril | 0.049 | si:dkey-56m19.5 | -0.011 |
| col5a2a | 0.048 | sox11b | -0.011 |
| mxra8b | 0.048 | sox3 | -0.011 |
| bhmt | 0.048 | her4.2 | -0.011 |
| hhla2a.1 | 0.048 | apex1 | -0.010 |
| col5a1 | 0.047 | chd4a | -0.010 |
| fap | 0.046 | CU467822.1 | -0.010 |
| serpinf1 | 0.045 | gfap | -0.010 |
| si:ch211-159i8.4 | 0.045 | her4.1 | -0.010 |
| ccdc80l2 | 0.044 | LOC798783 | -0.010 |
| mmp14a | 0.042 | lrrn1 | -0.010 |
| twist1a | 0.041 | nat8l | -0.010 |
| twist3 | 0.041 | pou3f1 | -0.010 |
| pmp22a | 0.040 | rcor2 | -0.010 |
| zgc:113307 | 0.040 | si:ch73-21g5.7 | -0.010 |
| col11a1b | 0.039 | sox19a | -0.010 |