Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| laptm5 | 0.486 | hmgb1b | -0.066 |
| coro1a | 0.469 | mdka | -0.062 |
| wasb | 0.440 | pfn2l | -0.061 |
| ccr9a | 0.432 | fabp3 | -0.060 |
| spi1b | 0.431 | hmgb3a | -0.058 |
| FERMT3 (1 of many) | 0.422 | jpt1b | -0.054 |
| grap2b | 0.421 | marcksb | -0.054 |
| itgae.2 | 0.420 | tspan7 | -0.053 |
| fcer1gl | 0.417 | hnrnpa0a | -0.050 |
| glipr1a | 0.415 | id1 | -0.050 |
| ptprc | 0.404 | si:ch211-288g17.3 | -0.050 |
| zgc:64051 | 0.404 | si:ch211-137a8.4 | -0.048 |
| lcp1 | 0.400 | nova2 | -0.047 |
| itgb2 | 0.391 | tuba1c | -0.047 |
| si:ch211-102c2.4 | 0.391 | her15.1 | -0.047 |
| si:ch73-248e21.5 | 0.390 | cx43.4 | -0.046 |
| gpr183a | 0.388 | sparc | -0.046 |
| cxcr3.2 | 0.387 | tuba1a | -0.046 |
| myo1f | 0.387 | nucks1a | -0.045 |
| wasa | 0.387 | si:ch73-46j18.5 | -0.045 |
| gmfg | 0.387 | tmeff1b | -0.044 |
| rgs13 | 0.385 | h2afva | -0.043 |
| si:dkey-102g19.3 | 0.381 | apex1 | -0.042 |
| tnfaip8l2a | 0.381 | mdkb | -0.042 |
| LOC100536213 | 0.379 | si:ch211-133n4.4 | -0.042 |
| plek | 0.376 | h1f0 | -0.041 |
| nrros | 0.373 | mex3b | -0.041 |
| ptpn6 | 0.371 | vdac1 | -0.041 |
| CT027744.2 | 0.369 | cdh2 | -0.039 |
| CU499330.1 | 0.367 | fam168a | -0.039 |
| il1b | 0.367 | sox11a | -0.039 |
| si:dkey-53k12.2 | 0.366 | sox11b | -0.039 |
| adgrg3 | 0.365 | vdac3 | -0.039 |
| parvg | 0.364 | XLOC-003690 | -0.039 |
| grap2a | 0.361 | gpm6aa | -0.038 |