Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| cx32.2 | 0.216 | hmgb1b | -0.045 |
| mpeg1.1 | 0.215 | tuba1c | -0.041 |
| cmklr1 | 0.209 | hmgb3a | -0.040 |
| havcr1 | 0.205 | marcksb | -0.040 |
| LOC108180725 | 0.199 | gpm6aa | -0.036 |
| CU499330.1 | 0.198 | mdkb | -0.036 |
| cxcr3.2 | 0.196 | nova2 | -0.034 |
| laptm5 | 0.195 | tmeff1b | -0.034 |
| rnaset2l | 0.190 | tuba1a | -0.034 |
| si:dkey-5n18.1 | 0.190 | elavl3 | -0.033 |
| si:dkey-148a17.6 | 0.187 | si:ch211-137a8.4 | -0.033 |
| coro1a | 0.186 | fabp3 | -0.032 |
| si:ch211-102c2.4 | 0.184 | si:ch211-288g17.3 | -0.032 |
| itgae.1 | 0.183 | hnrnpa0a | -0.031 |
| mfap4 | 0.182 | tubb5 | -0.031 |
| ptprc | 0.180 | epb41a | -0.030 |
| spi1a | 0.180 | si:ch211-133n4.4 | -0.030 |
| csf1rb | 0.179 | stmn1b | -0.030 |
| adgrg3 | 0.178 | cx43.4 | -0.029 |
| FERMT3 (1 of many) | 0.177 | mdka | -0.029 |
| BX649485.1 | 0.175 | sox11b | -0.029 |
| itgae.2 | 0.175 | atp6v0cb | -0.028 |
| marco | 0.175 | cadm3 | -0.028 |
| zgc:64051 | 0.175 | si:dkey-276j7.1 | -0.028 |
| fcer1gl | 0.173 | cspg5a | -0.027 |
| mfng | 0.170 | h2afva | -0.027 |
| si:zfos-1069f5.1 | 0.170 | nkain1 | -0.027 |
| il10ra | 0.169 | tmsb | -0.027 |
| fcer1g | 0.169 | zc4h2 | -0.027 |
| ccl34a.4 | 0.168 | her15.1 | -0.027 |
| gpr183a | 0.168 | apex1 | -0.026 |
| lgals3bpb | 0.168 | mex3b | -0.026 |
| c1qb | 0.167 | rnasekb | -0.026 |
| itgb2 | 0.165 | rtn1a | -0.026 |
| havcr2 | 0.164 | tox | -0.026 |