| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| her4.1 | 0.716 | matn4 | -0.208 |
| XLOC-003689 | 0.613 | wfdc2 | -0.195 |
| her4.4 | 0.594 | col11a1a | -0.185 |
| her15.1 | 0.592 | col11a2 | -0.182 |
| XLOC-003690 | 0.560 | lmx1bb | -0.175 |
| XLOC-003692 | 0.517 | col2a1a | -0.171 |
| dla | 0.457 | COX3 | -0.168 |
| dlb | 0.379 | metrnla | -0.166 |
| abhd6a | 0.350 | atp2b1a | -0.164 |
| her6 | 0.332 | si:ch1073-184j22.1 | -0.164 |
| her4.3 | 0.329 | hmx4 | -0.164 |
| LOC798783 | 0.325 | ckbb | -0.163 |
| lfng | 0.322 | col9a3 | -0.158 |
| notch1a | 0.311 | gpx2 | -0.157 |
| slc1a3a | 0.299 | thbs1b | -0.157 |
| ebf3a | 0.294 | ip6k2a | -0.157 |
| sox2 | 0.283 | col9a1b | -0.155 |
| hnrnpa0l | 0.283 | si:dkey-16p21.8 | -0.153 |
| apex1 | 0.281 | calm1b | -0.153 |
| her12 | 0.281 | b2ml | -0.153 |
| nr2f1b | 0.281 | CR925719.1 | -0.152 |
| si:ch211-222l21.1 | 0.278 | mt-co2 | -0.152 |
| hey1 | 0.278 | ctgfa | -0.150 |
| im:7152348 | 0.277 | nptna | -0.150 |
| her2 | 0.276 | col9a2 | -0.149 |
| khdrbs1a | 0.271 | frem3 | -0.149 |
| rtca | 0.269 | osbpl1a | -0.148 |
| her9 | 0.268 | tmc2a | -0.148 |
| insm1b | 0.267 | sfrp5 | -0.148 |
| nrarpb | 0.266 | cd164l2 | -0.148 |
| fabp3 | 0.266 | calml4a | -0.147 |
| hes6 | 0.264 | ccl44 | -0.147 |
| ddx39ab | 0.264 | si:ch73-15n15.3 | -0.147 |
| snrpd2 | 0.262 | atp1a3b | -0.145 |
| myclb | 0.261 | aldocb | -0.144 |