Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| epcam | 0.124 | hmgb1b | -0.049 |
| cd9b | 0.111 | nova2 | -0.048 |
| cfl1l | 0.108 | tuba1c | -0.048 |
| f11r.1 | 0.108 | gpm6aa | -0.044 |
| si:dkey-87o1.2 | 0.108 | hmgb3a | -0.044 |
| tmsb1 | 0.106 | rtn1a | -0.042 |
| spint2 | 0.105 | tuba1a | -0.042 |
| s100v1 | 0.104 | si:dkey-56m19.5 | -0.041 |
| cldnb | 0.103 | marcksl1a | -0.041 |
| si:ch73-347e22.8 | 0.103 | elavl3 | -0.040 |
| cldn7b | 0.102 | mdkb | -0.040 |
| zgc:153284 | 0.102 | stmn1b | -0.040 |
| capn2b | 0.100 | ckbb | -0.039 |
| oclna | 0.100 | gpm6ab | -0.039 |
| s100u | 0.098 | marcksb | -0.039 |
| zgc:153665 | 0.097 | si:ch211-137a8.4 | -0.039 |
| cdh1 | 0.096 | si:dkey-276j7.1 | -0.039 |
| gsnb | 0.096 | atp6v0cb | -0.037 |
| mvp | 0.096 | zc4h2 | -0.037 |
| spint1a | 0.096 | hnrnpa0a | -0.036 |
| arhgef5 | 0.095 | si:ch211-288g17.3 | -0.035 |
| capns1a | 0.095 | gng3 | -0.034 |
| si:dkey-19b23.12 | 0.095 | cspg5a | -0.033 |
| tmem54a | 0.095 | fam168a | -0.033 |
| gpa33a | 0.094 | si:ch211-133n4.4 | -0.033 |
| ap1s3b | 0.093 | sncb | -0.033 |
| krt4 | 0.093 | tmeff1b | -0.033 |
| s100a10b | 0.093 | tubb5 | -0.033 |
| icn | 0.092 | epb41a | -0.031 |
| f2rl1.2 | 0.091 | fabp3 | -0.031 |
| pkp3a | 0.091 | atpv0e2 | -0.030 |
| prr13 | 0.091 | cadm3 | -0.030 |
| wu:fb18f06 | 0.091 | dbn1 | -0.030 |
| zgc:174935 | 0.091 | elavl4 | -0.030 |
| myh9a | 0.090 | jpt1b | -0.030 |