Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| col4a2 | 0.148 | tuba1c | -0.026 |
| col4a1 | 0.147 | tuba1a | -0.025 |
| mcamb | 0.084 | her15.1 | -0.024 |
| si:dkey-261h17.1 | 0.074 | msi1 | -0.023 |
| pmp22a | 0.071 | si:ch211-137a8.4 | -0.023 |
| col5a2a | 0.068 | XLOC-003689 | -0.023 |
| fstl1b | 0.067 | XLOC-003690 | -0.023 |
| ednraa | 0.066 | elavl3 | -0.022 |
| tpm4a | 0.066 | nova2 | -0.022 |
| lama4 | 0.065 | sox3 | -0.022 |
| itga1 | 0.065 | XLOC-003692 | -0.022 |
| hlx1 | 0.064 | apex1 | -0.020 |
| tmem176 | 0.064 | gpm6aa | -0.020 |
| si:ch1073-291c23.2 | 0.064 | marcksb | -0.020 |
| krt18b | 0.063 | abhd6a | -0.020 |
| col5a1 | 0.063 | hes6 | -0.019 |
| pecam1 | 0.062 | hmgb1b | -0.019 |
| ponzr1 | 0.062 | nat8l | -0.019 |
| kdrl | 0.061 | si:dkey-276j7.1 | -0.019 |
| myct1a | 0.061 | sox11b | -0.019 |
| cdh5 | 0.060 | her4.2 | -0.019 |
| clec14a | 0.060 | epb41a | -0.018 |
| cpn1 | 0.060 | her12 | -0.018 |
| LOC101884756 | 0.060 | her4.1 | -0.018 |
| agtr2 | 0.059 | si:ch211-288g17.3 | -0.018 |
| cald1a | 0.059 | sox19a | -0.018 |
| flt1 | 0.059 | ddx39ab | -0.017 |
| myl9a | 0.059 | dla | -0.017 |
| myl9b | 0.058 | gfap | -0.017 |
| parvab | 0.058 | myt1a | -0.017 |
| ramp2 | 0.058 | snrpd1 | -0.017 |
| mfap2 | 0.058 | tmpob | -0.017 |
| arhgap31 | 0.057 | CU634008.1 | -0.017 |
| col6a1 | 0.057 | cadm3 | -0.016 |
| emp2 | 0.057 | CU467822.1 | -0.016 |