Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| shha | 0.505 | eef2b | -0.038 |
| zgc:136908 | 0.337 | ubap2b | -0.035 |
| CR407594.1 | 0.322 | sec62 | -0.034 |
| adra1bb | 0.305 | rbm22 | -0.032 |
| gnb3a | 0.230 | nop16 | -0.031 |
| si:dkey-1c7.2 | 0.226 | smad5 | -0.031 |
| adamts8a | 0.196 | rpl29 | -0.031 |
| ndst3 | 0.181 | ik | -0.030 |
| BX004816.1 | 0.173 | tp53 | -0.029 |
| kcnd2 | 0.168 | cstf3 | -0.028 |
| pth1b | 0.159 | cdc42l | -0.028 |
| CR352243.1 | 0.149 | hm13 | -0.028 |
| znf521 | 0.141 | supt6h | -0.028 |
| LOC101886196 | 0.140 | polb | -0.028 |
| si:dkeyp-74b6.2 | 0.139 | hirip3 | -0.027 |
| cacng7b | 0.137 | mgst3b | -0.027 |
| si:dkey-88j15.3 | 0.134 | sf1 | -0.027 |
| crb3a | 0.128 | lsm12a | -0.026 |
| LOC110440176 | 0.125 | alyref | -0.025 |
| XLOC-016096 | 0.124 | si:ch1073-190k2.1 | -0.025 |
| XLOC-039619 | 0.123 | cbx5 | -0.024 |
| mboat4 | 0.122 | akap8l | -0.024 |
| myo3a | 0.122 | oaz1a | -0.024 |
| CU571169.1 | 0.121 | rpf2 | -0.024 |
| si:ch73-54n14.2 | 0.119 | slc25a55a | -0.024 |
| nfe2l1b | 0.115 | mt-atp6 | -0.024 |
| itpk1b | 0.114 | psenen | -0.024 |
| BX469885.1 | 0.112 | brd3a | -0.023 |
| slco2b1 | 0.111 | cnbpb | -0.023 |
| lygl2 | 0.107 | rpl11 | -0.023 |
| cntn2 | 0.105 | add3b | -0.023 |
| CR450813.1 | 0.103 | zgc:194224 | -0.023 |
| slc5a8 | 0.100 | si:dkey-33c12.4 | -0.023 |
| CABZ01050238.1 | 0.100 | mis18bp1 | -0.023 |
| htr1fa | 0.099 | eif4e2 | -0.023 |