Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| col6a3 | 0.066 | XLOC-003690 | -0.021 |
| col6a4a | 0.066 | her15.1 | -0.021 |
| asip2b | 0.062 | marcksb | -0.019 |
| CABZ01092746.1 | 0.061 | snrpb | -0.019 |
| col6a2 | 0.060 | XLOC-003689 | -0.019 |
| col6a1 | 0.059 | XLOC-003692 | -0.019 |
| fmoda | 0.059 | ddx39ab | -0.018 |
| abi3bpa | 0.059 | si:ch211-137a8.4 | -0.018 |
| lum | 0.057 | snrpd1 | -0.018 |
| si:dkey-12l12.1 | 0.056 | apex1 | -0.017 |
| col5a1 | 0.056 | cx43.4 | -0.017 |
| col1a2 | 0.054 | dla | -0.017 |
| pmp22a | 0.054 | hnrnpub | -0.017 |
| col5a2a | 0.053 | mki67 | -0.017 |
| dcn | 0.053 | msi1 | -0.017 |
| twist2 | 0.053 | seta | -0.017 |
| mxra8b | 0.052 | snrpe | -0.017 |
| ms4a17a.7 | 0.051 | snrpf | -0.017 |
| col1a1b | 0.050 | cldn5a | -0.016 |
| col12a1a | 0.049 | her12 | -0.016 |
| hpdb | 0.049 | notch1a | -0.016 |
| mfap2 | 0.049 | sae1 | -0.016 |
| krt18b | 0.048 | si:dkey-56m19.5 | -0.016 |
| ms4a17a.11 | 0.048 | sox11b | -0.016 |
| abi3bpb | 0.047 | sox3 | -0.016 |
| pdgfrl | 0.047 | top1l | -0.016 |
| FQ378018.1 | 0.046 | abhd6a | -0.016 |
| fstl3 | 0.046 | her4.2 | -0.016 |
| mmp14a | 0.046 | chaf1a | -0.015 |
| s100v2 | 0.046 | her2 | -0.015 |
| si:ch73-380l3.2 | 0.046 | hnrnpa1b | -0.015 |
| twist1a | 0.046 | hnrnph1l | -0.015 |
| twist3 | 0.046 | ilf2 | -0.015 |
| asip1 | 0.045 | lig1 | -0.015 |
| sparc | 0.045 | mcm7 | -0.015 |