| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| scrt2 | 0.093 | id1 | -0.056 |
| elavl3 | 0.089 | XLOC-003690 | -0.051 |
| nhlh2 | 0.084 | msna | -0.048 |
| myt1b | 0.078 | rplp1 | -0.045 |
| ube2ql1 | 0.076 | cldn5a | -0.045 |
| stx1b | 0.071 | rps7 | -0.043 |
| scrt1a | 0.071 | si:dkey-151g10.6 | -0.043 |
| onecut2 | 0.071 | hmgb2a | -0.042 |
| rtn1a | 0.071 | fabp7a | -0.041 |
| stxbp1a | 0.071 | zgc:56493 | -0.041 |
| vamp2 | 0.068 | stmn1a | -0.040 |
| zgc:77784 | 0.067 | dut | -0.040 |
| myt1a | 0.067 | msi1 | -0.039 |
| jagn1a | 0.067 | COX7A2 (1 of many) | -0.039 |
| cpeb2 | 0.067 | her2 | -0.039 |
| prox1a | 0.066 | si:ch73-281n10.2 | -0.039 |
| sept5a | 0.065 | mdka | -0.039 |
| onecut1 | 0.064 | zgc:55461 | -0.039 |
| dlb | 0.064 | fosab | -0.039 |
| atp6v0cb | 0.063 | tpm4a | -0.038 |
| ebf3a | 0.062 | pa2g4b | -0.038 |
| ebf2 | 0.062 | tuba8l | -0.038 |
| stmn1b | 0.061 | tuba8l4 | -0.038 |
| lhx1b | 0.061 | rpl7 | -0.038 |
| syt2a | 0.061 | her9 | -0.037 |
| nova2 | 0.060 | sox2 | -0.037 |
| insm1b | 0.060 | ccng1 | -0.037 |
| BX294110.2 | 0.060 | pcna | -0.037 |
| cplx2 | 0.060 | sdc4 | -0.037 |
| nsg2 | 0.060 | rpl10a | -0.037 |
| LOC100537384 | 0.059 | her15.1 | -0.036 |
| ywhag2 | 0.059 | sox3 | -0.036 |
| nrxn1a | 0.059 | ranbp1 | -0.036 |
| tubb5 | 0.059 | vamp3 | -0.036 |
| atp1b2a | 0.058 | atp1a1b | -0.035 |