Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| cldni | 0.035 | tuba1c | -0.022 |
| myh9a | 0.035 | nova2 | -0.021 |
| thy1 | 0.035 | gpm6aa | -0.020 |
| ecrg4b | 0.033 | elavl3 | -0.018 |
| spaca4l | 0.033 | gpm6ab | -0.018 |
| cldn1 | 0.032 | stmn1b | -0.018 |
| mmp30 | 0.032 | tuba1a | -0.018 |
| pfn1 | 0.032 | atp6v0cb | -0.017 |
| pxna | 0.032 | ckbb | -0.017 |
| zgc:101810 | 0.032 | mdkb | -0.017 |
| cfl1l | 0.031 | rnasekb | -0.017 |
| lgals3b | 0.031 | rtn1a | -0.017 |
| rac2 | 0.031 | marcksl1a | -0.017 |
| tagln2 | 0.031 | gng3 | -0.016 |
| zgc:171775 | 0.031 | hmgb3a | -0.016 |
| si:dkey-102c8.3 | 0.031 | cspg5a | -0.015 |
| epcam | 0.030 | hbae3 | -0.015 |
| fam49ba | 0.030 | hmgb1b | -0.015 |
| padi2 | 0.030 | si:dkey-276j7.1 | -0.015 |
| pak2a | 0.030 | sncb | -0.015 |
| tp63 | 0.030 | tmsb | -0.015 |
| apoeb | 0.029 | zc4h2 | -0.015 |
| fermt1 | 0.029 | elavl4 | -0.014 |
| gpr31 | 0.029 | epb41a | -0.014 |
| itgb1b.1 | 0.029 | fam168a | -0.014 |
| lama5 | 0.029 | fez1 | -0.014 |
| spint1a | 0.029 | hbbe1.3 | -0.014 |
| zgc:92380 | 0.029 | rtn1b | -0.014 |
| cdh1 | 0.028 | si:dkeyp-75h12.5 | -0.014 |
| cebpb | 0.028 | stx1b | -0.014 |
| mapk12a | 0.028 | tmeff1b | -0.014 |
| myo1eb | 0.028 | tubb5 | -0.014 |
| zgc:92360 | 0.028 | vamp2 | -0.014 |
| abracl | 0.027 | atpv0e2 | -0.013 |
| dnase1l4.1 | 0.027 | cadm3 | -0.013 |