Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| zgc:154054 | 0.338 | hmgn7 | -0.124 |
| si:dkey-103g5.3 | 0.311 | ybx1 | -0.115 |
| tspan1 | 0.302 | marcksl1a | -0.107 |
| si:dkey-205h13.2 | 0.297 | hmgb3a | -0.096 |
| tmem176l.4 | 0.294 | atp5fa1 | -0.095 |
| negaly6 | 0.291 | hmga1a | -0.095 |
| LOC100536887 | 0.287 | khdrbs1a | -0.093 |
| krt1-c5 | 0.279 | col2a1a | -0.092 |
| ponzr6 | 0.277 | vdac1 | -0.092 |
| hopx | 0.276 | idh2 | -0.092 |
| pkhd1l1 | 0.274 | hnrnpa0b | -0.091 |
| cts12 | 0.270 | rpl22l1 | -0.090 |
| si:ch211-103f14.3 | 0.270 | hmgb2b | -0.090 |
| zgc:158343 | 0.265 | hmgn6 | -0.090 |
| wu:fj16a03 | 0.260 | tbx2b | -0.090 |
| gbgt1l3 | 0.257 | uqcrh | -0.087 |
| copz2 | 0.253 | cbx5 | -0.086 |
| moxd1l | 0.251 | otomp | -0.085 |
| soul2 | 0.251 | col11a1a | -0.083 |
| pabpc1b | 0.250 | foxp4 | -0.082 |
| spock2 | 0.244 | tpm4a | -0.082 |
| irg1l | 0.243 | col9a2 | -0.082 |
| cldn8 | 0.242 | si:dkey-98f17.3 | -0.082 |
| si:ch73-335l21.4 | 0.239 | agr2 | -0.080 |
| foxq1a | 0.238 | rps2 | -0.080 |
| elf3 | 0.232 | si:ch73-46j18.5 | -0.079 |
| cldnh | 0.230 | acbd7 | -0.079 |
| rnf183 | 0.230 | rpl6 | -0.079 |
| tcnbb | 0.228 | rpsa | -0.078 |
| LOC796314 | 0.227 | h2afvb | -0.078 |
| net1 | 0.225 | mdka | -0.078 |
| zgc:153911 | 0.219 | hmgb1b | -0.078 |
| si:ch211-39i22.1 | 0.217 | si:ch211-222l21.1 | -0.077 |
| tnks1bp1 | 0.216 | smarcb1b | -0.076 |
| tmprss9 | 0.216 | tma7 | -0.076 |