Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| jac9 | 0.584 | h3f3a | -0.041 |
| si:dkey-1m11.5 | 0.529 | ptmaa | -0.036 |
| si:ch211-160d14.15 | 0.446 | h2afvb | -0.033 |
| zgc:153184 | 0.421 | elavl3 | -0.032 |
| lrrtm4l2 | 0.415 | atp5f1b | -0.032 |
| LOC101882039 | 0.404 | sub1a | -0.030 |
| n4bp3 | 0.404 | atp5l | -0.029 |
| tmprss5 | 0.273 | rtn1a | -0.029 |
| gpr55a | 0.254 | si:dkey-276j7.1 | -0.028 |
| pros1 | 0.238 | oaz1b | -0.028 |
| f11r.2 | 0.233 | hmgb2a | -0.028 |
| LOC110439864.1 | 0.233 | prdx2 | -0.027 |
| skor1b | 0.226 | stmn1b | -0.027 |
| ly6m7 | 0.217 | sumo3a | -0.027 |
| lmod3 | 0.216 | cbx3a | -0.027 |
| LOC100535496 | 0.213 | tuba1a | -0.027 |
| si:dkey-71l4.4 | 0.196 | gnb1b | -0.026 |
| cpxm1a | 0.196 | gapdhs | -0.026 |
| scara3 | 0.193 | pvalb5 | -0.026 |
| itga9 | 0.192 | tspan2a | -0.026 |
| XLOC-031805 | 0.189 | insm1a | -0.026 |
| zmp:0000001062 | 0.189 | atp5pf | -0.025 |
| si:dkey-222h21.10 | 0.189 | atp5pd | -0.025 |
| LO018231.1 | 0.185 | hsbp1a | -0.025 |
| CU929240.1 | 0.183 | rnasekb | -0.025 |
| msx2a | 0.183 | hmgb3a | -0.024 |
| cxcl11.5 | 0.183 | dpy30 | -0.024 |
| lamc3 | 0.179 | zgc:55461 | -0.024 |
| trim33l | 0.170 | gnb1a | -0.024 |
| BX323839.1 | 0.170 | snrpf | -0.024 |
| XLOC-005580 | 0.169 | gtf2f2a | -0.024 |
| mir459 | 0.169 | adcyap1b | -0.024 |
| cdh27 | 0.169 | sncb | -0.024 |
| LOC103909840 | 0.167 | tmeff1b | -0.024 |
| ifnlr1 | 0.164 | atp5fa1 | -0.024 |