Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| lgals1l1 | 0.093 | si:ch211-137a8.4 | -0.029 |
| cldn1 | 0.090 | hmgb1b | -0.028 |
| col11a1a | 0.088 | nova2 | -0.028 |
| ecrg4b | 0.086 | marcksb | -0.027 |
| kera | 0.086 | tuba1c | -0.027 |
| cldni | 0.084 | si:ch211-288g17.3 | -0.026 |
| spaca4l | 0.084 | si:dkey-56m19.5 | -0.025 |
| zgc:101810 | 0.081 | fabp3 | -0.024 |
| zgc:86896 | 0.080 | si:dkey-276j7.1 | -0.024 |
| itgb1b.1 | 0.078 | hmgb3a | -0.023 |
| col14a1b | 0.077 | mex3b | -0.023 |
| col17a1a | 0.076 | sox11b | -0.023 |
| col5a3b | 0.076 | tuba1a | -0.023 |
| itgb3a | 0.075 | marcksl1a | -0.023 |
| col4a5 | 0.074 | elavl3 | -0.022 |
| padi2 | 0.074 | chd4a | -0.021 |
| si:dkey-102c8.3 | 0.074 | gpm6aa | -0.021 |
| hcls1 | 0.073 | h2afva | -0.021 |
| sparc | 0.073 | mdkb | -0.021 |
| col7a1 | 0.072 | nono | -0.021 |
| cxl34b.11 | 0.072 | rtn1a | -0.021 |
| tbx3b | 0.072 | smarce1 | -0.021 |
| tp63 | 0.072 | tmpob | -0.021 |
| zgc:136930 | 0.072 | fscn1a | -0.020 |
| col2a1b | 0.070 | hdac1 | -0.020 |
| itgb4 | 0.070 | hnrnpa0a | -0.020 |
| myh9a | 0.070 | stmn1b | -0.020 |
| pak2a | 0.070 | cbx3a | -0.019 |
| aqp3a | 0.069 | hes6 | -0.019 |
| col4a6 | 0.069 | hnrnpa1a | -0.019 |
| pfn1 | 0.069 | nkain1 | -0.019 |
| thy1 | 0.069 | seta | -0.019 |
| epgn | 0.068 | setb | -0.019 |
| lama5 | 0.068 | snrpd1 | -0.019 |
| loxl5b | 0.068 | apex1 | -0.018 |