Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| islr2 | 0.242 | XLOC-003690 | -0.139 |
| isl2a | 0.216 | id1 | -0.135 |
| isl2b | 0.215 | her15.1 | -0.130 |
| elavl4 | 0.204 | mdka | -0.127 |
| si:ch211-247j9.1 | 0.202 | hmgb2a | -0.118 |
| slc18a3a | 0.190 | cldn5a | -0.113 |
| mnx1 | 0.178 | sox3 | -0.112 |
| pik3r3b | 0.178 | XLOC-003689 | -0.112 |
| nanos1 | 0.173 | zgc:56493 | -0.107 |
| myt1b | 0.170 | btg2 | -0.106 |
| gng3 | 0.168 | notch3 | -0.104 |
| stmn1b | 0.163 | actb2 | -0.104 |
| rtn1b | 0.162 | tspan7 | -0.099 |
| slit3 | 0.158 | msna | -0.098 |
| sox4a | 0.158 | COX7A2 (1 of many) | -0.098 |
| isl1 | 0.156 | sparc | -0.097 |
| cplx2 | 0.152 | sdc4 | -0.097 |
| syt2a | 0.151 | XLOC-003692 | -0.096 |
| sncb | 0.150 | msi1 | -0.095 |
| xpr1a | 0.149 | vamp3 | -0.095 |
| elavl3 | 0.147 | rpl12 | -0.094 |
| prph | 0.146 | her4.2 | -0.094 |
| adcyap1b | 0.146 | eef1a1l1 | -0.092 |
| rbfox1 | 0.145 | rps2 | -0.091 |
| adam22 | 0.145 | rpl23 | -0.090 |
| esrrga | 0.145 | si:dkey-151g10.6 | -0.090 |
| tuba2 | 0.144 | rps15a | -0.089 |
| tmsb | 0.143 | rps7 | -0.089 |
| cntn2 | 0.143 | her4.1 | -0.088 |
| lhx4 | 0.142 | fosab | -0.088 |
| gpm6ab | 0.142 | her12 | -0.088 |
| tmem59l | 0.141 | sb:cb81 | -0.087 |
| nsg2 | 0.141 | sox19a | -0.087 |
| tmtc1 | 0.141 | gpm6bb | -0.086 |
| LOC100537384 | 0.141 | rpl26 | -0.086 |