Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| shisa9a | 0.272 | hmgb2a | -0.068 |
| nhlh2 | 0.195 | tubb4b | -0.046 |
| trpc5b | 0.184 | hmga1a | -0.046 |
| slc6a9 | 0.171 | tuba8l4 | -0.042 |
| ebf1a | 0.170 | fabp7a | -0.042 |
| zgc:172323 | 0.169 | rpl26 | -0.041 |
| camkvb | 0.167 | stmn1a | -0.041 |
| grin1a | 0.158 | ahcy | -0.040 |
| XLOC-044281 | 0.141 | zgc:56493 | -0.040 |
| syt1a | 0.138 | rpl5a | -0.039 |
| kctd12.1 | 0.135 | msi1 | -0.038 |
| rnd1a | 0.133 | rpl38 | -0.038 |
| rprma | 0.131 | rpl29 | -0.038 |
| mir181b-3 | 0.125 | rps28 | -0.038 |
| kcnj5 | 0.124 | msna | -0.038 |
| slc32a1 | 0.123 | si:dkey-151g10.6 | -0.038 |
| CABZ01072885.1 | 0.123 | rpl18 | -0.037 |
| si:dkey-46i9.1 | 0.122 | rpl7 | -0.037 |
| CR974456.1 | 0.118 | pcna | -0.037 |
| roraa | 0.118 | mdka | -0.037 |
| dlgap3 | 0.116 | rrm1 | -0.037 |
| gabrb2 | 0.113 | ran | -0.037 |
| cacng4a | 0.113 | rps27.1 | -0.037 |
| gng2 | 0.111 | rpl12 | -0.036 |
| grin2aa | 0.111 | rps26l | -0.036 |
| ccdc85a | 0.111 | rps4x | -0.036 |
| pax6a | 0.110 | rps6 | -0.036 |
| ndrg2 | 0.110 | tma7 | -0.036 |
| shank3a | 0.109 | tuba8l | -0.036 |
| rpp25a | 0.109 | banf1 | -0.036 |
| prdm13 | 0.107 | rps26 | -0.035 |
| sncb | 0.105 | rplp2l | -0.035 |
| phlda3 | 0.105 | dut | -0.035 |
| RAMP1 | 0.103 | rplp1 | -0.035 |
| LOC101884666 | 0.102 | rps3a | -0.035 |