Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hnf1a | 0.712 | col1a1a | -0.039 |
| XLOC-020906 | 0.639 | rpl29 | -0.036 |
| svopa | 0.474 | and1 | -0.032 |
| chrm2a | 0.417 | pnrc2 | -0.031 |
| tbx4 | 0.390 | ccng1 | -0.031 |
| tmprss3a | 0.322 | and2 | -0.030 |
| rsad2 | 0.321 | ahnak | -0.030 |
| trh | 0.265 | cap1 | -0.028 |
| GRB14 | 0.250 | capns1b | -0.027 |
| slc2a11l | 0.246 | si:ch1073-325m22.2 | -0.027 |
| gabbr2 | 0.238 | tpm3 | -0.027 |
| si:dkey-221l4.11 | 0.236 | fosab | -0.027 |
| rac1l | 0.229 | dnase1l4.1 | -0.027 |
| syt14a | 0.227 | sec61b | -0.026 |
| MFAP4 (1 of many) | 0.226 | pabpc1a | -0.026 |
| LOC108179161 | 0.225 | CABZ01074130.1 | -0.026 |
| clrn2 | 0.222 | hdlbpa | -0.026 |
| npdc1b | 0.222 | im:7150988 | -0.026 |
| BX936382.1 | 0.218 | capza1a | -0.025 |
| csmd2 | 0.217 | ppt1 | -0.025 |
| lrrc4.2 | 0.214 | rap1b | -0.024 |
| si:dkey-88j15.4 | 0.214 | chac1 | -0.024 |
| elfn1a | 0.213 | klf6a | -0.024 |
| si:dkey-65j6.2 | 0.209 | kctd5a | -0.024 |
| iqsec2a | 0.207 | sept10 | -0.024 |
| zgc:195023 | 0.205 | si:dkey-102c8.3 | -0.024 |
| kirrel1b | 0.203 | aqp3a | -0.023 |
| LO017848.1 | 0.195 | zgc:153867 | -0.023 |
| znf1004 | 0.193 | fmodb | -0.023 |
| ubac2 | 0.193 | xbp1 | -0.023 |
| slc25a15b | 0.191 | actb1 | -0.022 |
| si:ch73-116o1.2 | 0.189 | dap1b | -0.022 |
| nlgn1 | 0.183 | bcam | -0.022 |
| LOC101885668 | 0.180 | qkia | -0.022 |
| cbln1 | 0.179 | ier2a | -0.022 |